Multimode Observation of Virus Capsid Assembly
病毒衣壳组装的多模式观察
基本信息
- 批准号:10587218
- 负责人:
- 金额:$ 49.34万
- 依托单位:
- 依托单位国家:美国
- 项目类别:
- 财政年份:2016
- 资助国家:美国
- 起止时间:2016-03-14 至 2027-07-31
- 项目状态:未结题
- 来源:
- 关键词:AddressAffinityAllosteric RegulationAntibodiesAntiviral AgentsBehaviorBindingBiochemistryBiological AssayBiophysicsBiotechnologyCapsidCapsid ProteinsCellsChargeChemicalsChemistryChronicChronic Hepatitis BComplexCrowdingCytoplasmDNA biosynthesisDataDetectionDevelopmentDevicesDissociationEndosomesEngineeringEnvironmentEpitopesExposure toFundingGenomeGoalsGrowthHepatitis B VirusKineticsLearningLife Cycle StagesLigand BindingLinkMass Spectrum AnalysisMeasuresMetabolicMethodsModelingModificationMolecular BiologyOxidation-ReductionPaperPenetrationPeptidesProteinsRNAReactionReagentResearchRoentgen RaysRoleSelf CorrectionSignal TransductionStructureSurfaceSystemTechniquesTechnologyTestingTextThermodynamicsTimeVariantViralViral GenomeViral PackagingVirusVirus AssemblyVirus DiseasesVirus-like particledelivery vehicledimerfallsflexibilityhuman pathogenimprovedin vivomacromoleculemanparticle exposurepractical applicationpreservationprotein purificationreceptorreceptor bindingresponsesealself assemblysingle moleculesmall moleculetoolviral RNA
项目摘要
Summary
The capsid of the Hepatitis B Virus (HBV) is a 120-homodimer T=4 icosahedron. In vivo, it self-assembles,
packages viral RNA, serves as a metabolic compartment for DNA synthesis, and trafficks within the cell.
Its assembly and disassembly have become targets for potent antivirals. In the previous funding period,
we characterized assembly and disassembly with purified protein using structural, single molecule, and
bulk studies of assembly products and reactions. We characterized the allosteric transitions that activated
assembly, demonstrated the importance of reversibility during self-association for fidelity, and identified
roles of nucleation for directing the assembly path.
In this proposal, we develop hypotheses to take advantage of these results to engineer virus-like particles
with programmable assembly, cargo packaging, delivery, and release. In preliminary studies, we
developed a method for targeting cargo to a capsid by linking the cargo to a small molecule that binds
capsid with high affinity, essentially using an antiviral as a targeting device. This method can be applied to
any cargo. In some cases, it is desirable to display cargo on the capsid exterior, in other cases it is desirable
to package it within the capsid. In preliminary data, we demonstrate an approach to making “holey” capsids
that expose the particle interior and can be re-sealed to enclose the contents. Using this same technology,
we can make patches on the capsid surface; this can be used for displaying patches of receptor-binding
ligands or cell-penetrating peptides. Cargo, packaged within a capsid, is not deliverable unless it can be
released. In preliminary data, we developed techniques for triggering capsid disassembly in response to
redox potential, taking advantage of chemically-induced metastability. This same approach can be applied
to other triggering signals. The ultimate goal of these studies is to combine the approaches to a practical
end: we propose to build two model biotech reagents, one to measure antibody levels and the other to
deliver packaged cargo to specific cells. These approaches are each built on an understanding of the
biochemistry and biophysics of HBV capsid assembly.
HBV is one the smallest human pathogens. It is remarkably efficient at packaging its genome and delivering
it to target cells. Based on our understanding of capsid assembly and capsid biophysics, we will develop
approaches to specifically packaging cargo molecules and delivering these reagents intracellularly. The
tools arising from this research will provide a means for man to take advantage of HBV.
概括
乙型肝炎病毒 (HBV) 的衣壳是 120 同二聚体 T=4 二十面体。在体内,它自组装,
包装病毒RNA,作为DNA合成的代谢区室,并在细胞内运输。
它的组装和分解已成为有效抗病毒药物的目标。在上一个资助期内,
我们使用结构、单分子和纯化蛋白质来表征组装和拆卸
组装产品和反应的批量研究。我们表征了激活的变构转变
组装,证明了自关联过程中可逆性对于保真度的重要性,并确定了
成核在指导组装路径中的作用。
在这个提案中,我们提出了假设,以利用这些结果来设计病毒样颗粒
具有可编程组装、货物包装、交付和释放功能。在初步研究中,我们
开发了一种通过将货物连接到结合的小分子来将货物靶向衣壳的方法
衣壳具有高亲和力,本质上使用抗病毒药物作为靶向装置。该方法可应用于
任何货物。在某些情况下,需要在衣壳外部展示货物,在其他情况下,则需要
将其包装在衣壳内。在初步数据中,我们展示了一种制作“多孔”衣壳的方法
暴露颗粒内部并可以重新密封以封闭内容物。使用同样的技术,
我们可以在衣壳表面制作补丁;这可用于显示受体结合的斑块
配体或细胞穿透肽。包装在衣壳内的货物不能交付,除非可以
释放。在初步数据中,我们开发了触发衣壳分解的技术,以响应
氧化还原电位,利用化学诱导的亚稳定性。可以应用同样的方法
到其他触发信号。这些研究的最终目标是将这些方法结合到实际中
结束:我们建议构建两种生物技术试剂模型,一种用于测量抗体水平,另一种用于测量抗体水平
将包装好的货物运送到特定的单元。这些方法均建立在对
HBV衣壳组装的生物化学和生物物理学。
乙型肝炎病毒是最小的人类病原体之一。它在包装基因组和传递基因组方面非常有效
它针对靶细胞。基于我们对衣壳组装和衣壳生物物理学的理解,我们将开发
特异性包装货物分子并在细胞内递送这些试剂的方法。这
这项研究产生的工具将为人类利用乙肝病毒提供一种手段。
项目成果
期刊论文数量(25)
专著数量(0)
科研奖励数量(0)
会议论文数量(0)
专利数量(0)
Hepatitis B virus core protein allosteric modulators can distort and disrupt intact capsids.
- DOI:10.7554/elife.31473
- 发表时间:2018-01-29
- 期刊:
- 影响因子:7.7
- 作者:Schlicksup CJ;Wang JC;Francis S;Venkatakrishnan B;Turner WW;VanNieuwenhze M;Zlotnick A
- 通讯作者:Zlotnick A
The Structural Biology of Hepatitis B Virus: Form and Function.
- DOI:10.1146/annurev-virology-110615-042238
- 发表时间:2016-09-29
- 期刊:
- 影响因子:11.3
- 作者:Venkatakrishnan B;Zlotnick A
- 通讯作者:Zlotnick A
Geometric Defects and Icosahedral Viruses.
- DOI:10.3390/v10010025
- 发表时间:2018-01-04
- 期刊:
- 影响因子:0
- 作者:Wang JC;Mukhopadhyay S;Zlotnick A
- 通讯作者:Zlotnick A
Dynamics of Hepatitis B Virus Capsid Protein Dimer Regulate Assembly through an Allosteric Network.
丙型肝炎病毒衣壳蛋白二聚体的动力学通过变构网络调节组装。
- DOI:10.1021/acschembio.0c00481
- 发表时间:2020-08-21
- 期刊:
- 影响因子:4
- 作者:Patterson A;Zhao Z;Waymire E;Zlotnick A;Bothner B
- 通讯作者:Bothner B
An Assembly-Activating Site in the Hepatitis B Virus Capsid Protein Can Also Trigger Disassembly.
- DOI:10.1021/acschembio.8b00283
- 发表时间:2018-08-17
- 期刊:
- 影响因子:4
- 作者:Qazi S;Schlicksup CJ;Rittichier J;VanNieuwenhze MS;Zlotnick A
- 通讯作者:Zlotnick A
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Adam Zlotnick的其他文献
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{{ truncateString('Adam Zlotnick', 18)}}的其他基金
STRUCTURAL BASIS OF CONTROLLING VIRUS CAPSID ASSEMBLY
控制病毒衣壳组装的结构基础
- 批准号:
8171995 - 财政年份:2010
- 资助金额:
$ 49.34万 - 项目类别:
2010 Molecular Biology of Hepatitis B Viruses Meeting
2010年乙型肝炎病毒分子生物学会议
- 批准号:
7915035 - 财政年份:2010
- 资助金额:
$ 49.34万 - 项目类别:
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