Structural Basis for RCC1 Directed Recruitment of Ran GTPase to Chromatin

RCC1 定向招募 Ran GTP 酶至染色质的结构基础

• 批准号: 7880609
• 负责人: SONG TAN
• 金额: $ 30.17万
• 依托单位: PENNSYLVANIA STATE UNIVERSITY, THE
• 依托单位国家: 美国
• 财政年份: 2009
• 资助国家: 美国
• 起止时间: 2009-08-01 至 2013-07-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/7880609
• 关键词: Address; Affinity; Binding; Biochemical; Cell Nucleus; Cell division; Cell physiology; Cells; Chromatin; Chromosomes; Complement; Complex; Cytoplasm; Data; Docking; Ensure; Enzymes; Eukaryotic Cell; Fluorescence Resonance Energy Transfer; GTP Binding; Genetic; Genome; Goals; Guanine; Guanine Nucleotide Exchange Factors; Guanosine; Guanosine Triphosphate Phosphohydrolases; Herpesviridae; Histone H4; Histones; Interferometry; Investigation; Kaposi Sarcoma; Malignant Neoplasms; Maps; Mediating; Methods; Mitosis; Mitotic; Mitotic spindle; Modeling; Molecular; Molecular Models; Monomeric GTP-Binding Proteins; Mutation; Neutrons; Nuclear Pore Complex; Nucleosome Core Particle; Nucleosomes; Nucleotides; Peptides; Physical condensation; Positioning Attribute; Procedures; Process; Protein Binding; Proteins; Recruitment Activity; Reporting; Resolution; Roentgen Rays; Role; Running; Solutions; Structural Models; Structure; System; Testing; Viral; Viral Genome; base; daughter cell; electron density; improved; insight; macromolecule; molecular modeling; nucleocytoplasmic transport; public health relevance; ran GTP-Binding Protein; research study

DESCRIPTION (provided by applicant): A eukaryotic cell must be able to transport macromolecules directionally between its nucleus and cytoplasm, and to divide the cell through mitosis. These fundamental processes are controlled by localizing the small Ran guanosine triphosphatase (GTPase) protein in its GDP or GTP bound state within the cytoplasm or the nucleus respectively, and by generating a gradient of RanGTP around the chromosomes. The spatial localization of RanGTP in the nucleus is achieved through chromatin bound RCC1 (regulator of chromosomal condensation) protein. RCC1 recruits Ran to the chromosomes and promotes the exchange of RanGDP for RanGTP, thereby creating a high concentration of RanGTP around chromosomes. We currently lack a molecular understanding of how RCC1 binds to the nucleosome and how RCC1 recruits Ran to the nucleosome, despite the critical importance of these interactions for basic cellular processes. Our overall goal is therefore to develop atomic models which describe how RCC1 and Ran bind to the nucleosome core particle. Our specific aims are: 1. Define how RCC1 binds to nucleosomes through biochemical methods. We will challenge structural models for how RCC1 interacts with the nucleosome through pulldown, biolayer interferometry and fluorescence resonance energy transfer experiments. 2. Determine the structure of the RCC1/nucleosome complex. We will use single crystals of the RCC1/nucleosome complex we have grown to determine the structure of the complex. These crystallographic studies will be complemented with small angle X-ray and neutron scattering experiments to provide a solution structure of the complex. 3. Determine how chromatin-bound RCC1 binds to and activates Ran. We will test models for the Ran/RCC1/nucleosome complex by analyzing the effects of directed mutations on binding of Ran to the RCC1/nucleosome complex and on Ran's nucleotide exchange activity in the presence of RCC1 and the nucleosome. PUBLIC HEALTH RELEVANCE: When a cell divides, each daughter cell must receive an equal share of the chromosomes which carry the cell's genetic blueprint. Unequal or improper distribution of the chromosomes can result in genetic instabilities and cancer. Our studies are directed at visualizing the molecules which regulate the equal distribution of chromosomes during cell division by creating a GPS or genome-positioning system for a eukaryotic cell.

描述(申请人提供)：真核细胞必须能够在其核和细胞质之间定向运输大分子，并通过有丝分裂来分裂细胞。这些基本过程是通过分别在细胞质或细胞核内定位处于GDP或GTP结合状态的小RNA鸟苷三磷酸酶(GTPase)蛋白，以及通过在染色体周围产生RanGTP梯度来控制的。RanGTP在细胞核中的空间定位是通过染色质结合的RCC1(染色体凝聚调节蛋白)蛋白实现的。RCC1招募RUN到染色体上，并促进RanGDP与RanGTP的交换，从而在染色体周围产生高浓度的RanGTP。目前，我们缺乏对RCC1如何与核小体结合以及RCC1新兵如何跑到核小体的分子理解，尽管这些相互作用对于基本的细胞过程至关重要。因此，我们的总体目标是开发描述RCC1和RAN如何与核小体核心颗粒结合的原子模型。我们的具体目标是：1.通过生化方法确定RCC1如何与核小体结合。我们将通过下拉实验、生物层干涉测量和荧光共振能量转移实验来挑战RCC1如何与核小体相互作用的结构模型。2.确定RCC1/核小体复合体的结构。我们将使用我们生长的RCC1/核小体复合体的单晶来确定该复合体的结构。这些结晶学研究将与小角X射线和中子散射实验相补充，以提供该络合物的溶液结构。3.确定染色质结合的RCC1如何与RAN结合并激活。我们将通过分析定向突变对RAN与RCC1/核小体复合体结合的影响以及在RCC1和核小体存在下对RAN的核苷酸交换活性的影响来测试RAN/RCC1/核小体复合体的模型。与公共卫生相关：当细胞分裂时，每个子细胞必须获得携带细胞基因蓝图的同等份额的染色体。染色体分布不均匀或不恰当会导致遗传不稳定和癌症。我们的研究旨在通过为真核细胞创建GPS或基因组定位系统来可视化在细胞分裂过程中调节染色体平等分布的分子。