Advanced Development of TIES-Enhancing Access to Tissue for Cancer Research

TIES 的先进发展——增强癌症研究组织的获取

• 批准号: 8901082
• 负责人: Rebecca S Jacobson
• 金额: $ 63.87万
• 依托单位: UNIVERSITY OF PITTSBURGH AT PITTSBURGH
• 依托单位国家: 美国
• 财政年份: 2013
• 资助国家: 美国
• 起止时间: 2013-09-25 至 2016-07-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/8901082
• 关键词: Advanced Development; Agreement; Archives; Authorization documentation; Automobile Driving; Biological Assay; Biological Markers; Biological Models; Cancer Center; Cancer Patient; Cancer Research Network; Collaborations; Computer software; Consent; Data; Development; Disease; Feedback; Formalin; Grant; Health; Health Sciences; Human; Imagery; Individual; Informatics; Institution; Institutional Review Boards; Interview; Malignant Neoplasms; Malignant neoplasm of liver; Malignant neoplasm of ovary; Malignant neoplasm of urinary bladder; Management Audit; Measures; Methods; Modeling; Molecular; Molecular Analysis; Natural Language Processing; Paraffin; Paraffin Embedding; Patient Care; Patients; Pennsylvania; Phenotype; Pilot Projects; Policies; Principal Investigator; Privacy; Process; Production; Productivity; Recruitment Activity; Registries; Research; Research Personnel; Resources; Reverse Transcriptase Polymerase Chain Reaction; Roswell Park Cancer Institute; Security; Services; Site; Slide; Specimen; Speed; Structure; Surveys; System; Time; Tissue Microarray; Tissues; Translational Research; Trust; Universities; Validation; Work; anticancer research; computerized data processing; design; electronic data; exome; genome sequencing; human tissue; imaging biomarker; improved; malignant breast neoplasm; melanoma; member; mobile application; personalized medicine; repository; software systems; tumor; usability; virtual

DESCRIPTION (provided by applicant): Archived human tissues are an essential resource for translational research. Formalin-fixed, paraffin-embedded (FFPE) tissues from cancer patients are used in a wide range of assays, including RT-PCR, SNP profiling, multiplex biomarkers, imaging biomarkers, targeted exome, whole exome, and whole genome sequencing. Remainder FFPE tissues generated during patient care are 'retrospective'; use of these tissues under specific conditions does not require consent. For personalized medicine researchers, these specimens are vital resources enabling biomarker validation, detailed molecular analysis, and systems modeling before application is made to individual patients. But access to these human tissues is often a rate limiting factor in cancer research. We propose advanced development of the TIES software to (1) increase institutional capacity for using FFPE to support molecular characterization of human tumors, (2) increase access to tissues within cancer centers, and (3) improve the ability to share tissues and associated phenotype data among cancer centers.

描述(由申请者提供)：存档的人体组织是翻译研究的重要资源。来自癌症患者的福尔马林固定、石蜡包埋(FFPE)组织被用于广泛的分析，包括RT-PCR、SNP图谱、多重生物标记物、成像生物标记物、靶向外显子组、整个外显子组和全基因组测序。在病人护理过程中产生的其余FFPE组织是“追溯的”；在特定条件下使用这些组织不需要征得同意。对于个性化医学研究人员来说，这些标本是重要的资源，能够在应用于个别患者之前进行生物标记物验证、详细的分子分析和系统建模。但在癌症研究中，接触这些人体组织往往是一个速度限制因素。我们建议对TIES软件进行高级开发，以(1)提高使用FFPE支持人类肿瘤分子特征的机构能力，(2)增加对癌症中心内组织的访问，以及(3)提高癌症中心之间共享组织和相关表型数据的能力。