Regulatory mechanisms controlling alternative splicing

人类基因组拥有约21000个基因;基因编码蛋白质，但基因本身是分裂的，将蛋白质编码区组织成称为“外显子”的离散块。 基因在一个称为“转录”的过程中被转录成RNA。 在基因转录成RNA后，外显子在一个称为“剪接”的过程中被缝合在一起。 剪接过程还可以将外显子以替代顺序缝合在一起，这将产生具有不同序列和功能的蛋白质。 细胞内独特的蛋白质组由调节转录和剪接的控制过程定义，以选择使用哪些基因和外显子的顺序。 这种调节是细胞修改其蛋白质库以适应其环境的主要手段。 最近，科学家们已经了解到剪接和转录不是独立调节的，而是由蛋白质和尚未了解的过程共同调节的。 我们研究了两种密切相关的人类蛋白质，它们可以调节外显子的顺序并调节转录水平。 这些蛋白质是酶，称为“激酶”，它将磷酸分子添加到其他蛋白质上的位点，从而改变它们的功能。 在我们的实验中，我们已经确定了与这些激酶相互作用的其他几种蛋白质，从而提供了这些激酶如何执行其功能的信息。 在我们的研究中，我们将描述这两种激酶及其相互作用蛋白的特定功能。 从这些信息中，我们将更多地了解控制外显子剪接顺序的过程如何与将基因转录成RNA的过程的活性协调。 这将帮助我们理解，也许是控制，细胞如何表达一组独特的基因来生存和生长。

The human genome possesses ~21000 genes; genes encode proteins, but the genes themselves are split, organizing the protein coding regions into discrete blocks called "exons". The genes are transcribed into RNA in a process called "transcription". After the genes are transcribed into RNA, the exons are stitched together in a process called "splicing". The splicing process can also stitch the exons together in alternative orders which will generate proteins with different sequences and functions. The unique set of proteins within a cell is defined by the control processes that regulate transcription and splicing to select which genes and which order of the exons are used. This regulation is a primary means cells modify their protein repertoire to adapt to their environment. Recently, scientists have learned that splicing and transcription are not regulated independently, but are co-regulated by proteins and processes not yet understood. We study two closely related human proteins that may regulate both the order of exons and modulate the level of transcription. These proteins are enzymes, called "kinases", which add a phosphate molecule to sites on other proteins, thus modifying their function. In our experiments, we have identified several other proteins that interact with these kinases, thus providing information on how these kinases carry out their functions. In our studies, we will characterize the specific functions of both kinases and their interacting proteins. From this information, we will learn more about how the process that controls the order of exon splicing is coordinated with the activity of the process that transcribes genes into RNA. This will help us understand, and perhaps control, how cells express a unique set of genes to live and grow.