课题基金基金详情
莱茵衣藻蛋白全局聚泛素化对缺氮胁迫响应及其对储能物质代谢调控的机理研究
结题报告
批准号:
31470432
项目类别:
面上项目
资助金额:
80.0 万元
负责人:
曹旭鹏
学科分类:
C0208.植物资源保护与利用
结题年份:
2018
批准年份:
2014
项目状态:
已结题
项目参与者:
陆洪斌、姚长洪、刘颖慧、艾江宁、褚亚东、王海涛、申培丽
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中文摘要
微藻响应营养胁迫信号经胞质重构进行储能物质积累的分子机制尚不清楚。蛋白聚泛素化是一种高度保守的调控方式。前期转录研究发现,缺氮胁迫时伴随储能物质积累泛素介导蛋白水解途径基因表达变化显著,推测蛋白聚泛素化在微藻储能物质代谢调控中起重要作用。本项目以野生型莱茵衣藻cc-124和突变株sta6为对象,利用聚泛素特异富集-μHPLC-MS/MS、基因敲除-回补等方法,结合细胞生理生化分析和免疫组化技术,进行:1)莱茵衣藻全局聚泛素化蛋白数据库构建及莱茵衣藻聚泛素化比较蛋白组学研究;2) 基于细胞生理生化和基因工程操作的关键聚泛素化蛋白识别与功能验证研究,从而深入阐释蛋白聚泛素化对微藻储能物质代谢调控的分子机理。本研究将丰富蛋白聚泛素化调控微藻代谢的基础理论,并将获得大量新的生物信息和材料,在工程微藻新性状理性设计、微藻合成生物学研究开展及新培养调控技术开发方面具有重要意义。
英文摘要
It's well known that most of microalgae accumulate energy storage materials under the nutrition deprivation, by way of cytoplasmic reassembly. But the mechanisms underlying is unknown. Polyubiquition is a highly conserved post-translation modification among eukaryotes, involving in almost every bioprocess in the cells. In our previous transcriptome study of microalgae, accompanying with the accumulation of energy storage materials, the genes in ubiquitin mediated proteolysis changed significantly. It's postulated that the polyubiquition plays an important role in regulation of the metabolism of energy storage materials. Here, the wild type stain of Chlamydomonas reinhardtii cc-124, as well as the starchless strain sta6 with ADP-glucose pyrophosphorylase defective mutation, was chosen as the model to investigate the shift of polyubiquition under the nitrogen deprivation and its effects on the regulation of energy storage material's metabolism, by way of comparative proteomocs analysis of polyubiquited proteins, gene knock out or RNAi, chemical and physiological analysis and immunostaining. In details, two approaches will be carried out: 1) the construction of database for polyubiquited proteins following the different stress stages and the comparative analysis of data, referring to KEGG pathway information, to distinguish the key polyubiquited proteins for verification and function prediction; 2) the "wet" verification of targeting proteins by way of immunostaining, chemical and physiological analysis and genetic operations. The goal of this project is to illustrate the molecular regulation mechanism of polyubiquition on the energy storage material's metabolism. The result of this project will enrich the knowledge of polyubiquition on the metabolism regulation, and will provide new bioinformation and materials for the future studies on the rational design of engineered strains, the synthetic biology based on microalgae and the new regulation technologies in the practice of large scale cultivation of microalgae.
本项目拟从细胞全局聚泛素化蛋白质组分析入手,揭示氮缺乏条件下聚泛素化对莱茵衣藻细胞中储能物质(淀粉和中性脂)积累的贡献,建立莱茵衣藻聚泛素化蛋白数据库,重点开展不同生长状态莱茵衣藻聚泛素化蛋白的比较蛋白质组学研究,共鉴定到了986个蛋白,并确认其中有41个主要蛋白在正常生长过程中存在泛素化现象,而另有41个蛋白在缺氮后不同时期发生了泛素化,不同状态下均检测到泛素化的蛋白15个。通过对共性蛋白进行进一步分析,发现叶绿体型磷酸甘油醛脱氢酶(GAPDH3,Cre01.g010900)在缺氮后表现出了稳定的泛素化,而该蛋白既是光合固碳暗反应的关键酶之一,又是碳水化合物代谢的重要节点酶,且叶绿体型GAPDH人们对其功能和作用知之甚少,被确定作为目标进行微藻储能物质积累调控蛋白和关键调控节点研究。先后建立了叶绿体脂质组、全细胞脂质组分析和核转化叶绿体表达平台,对GAPDH3参与微藻储能物质积累调控的贡献进行了探索,最终提高莱茵衣藻储能物质的生产效率,在富营养条件下获得了氮胁迫条件下的储能物质生产速率,且生长无明显影响,为进一步开发能源微藻应用提供了有力的藻种。同时,基于本项目已有工作,得到了自然基金面上项目的后续支持。
期刊论文列表
专著列表
科研奖励列表
会议论文列表
专利列表
DOI:10.1007/s00253-018-8770-6
发表时间:2018-04-01
期刊:APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
影响因子:5
作者:Feng, Yanbin;Zhang, Yunxiu;Xue, Song
通讯作者:Xue, Song
FabG can function as PhaB for poly-3-hydroxybutyrate biosynthesis in photosynthetic cyanobacteria Synechocystis sp PCC 6803
FabG 可充当光合蓝细菌集胞藻 PCC 6803 中聚 3-羟基丁酸酯生物合成的 PhaB
DOI:10.1080/21655979.2017.1317574
发表时间:2017
期刊:Bioengineered
影响因子:4.9
作者:Zhang Haowei;Liu Yinghui;Yao Changhong;Cao Xupeng;Tian Jing;Xue Song
通讯作者:Xue Song
Structural Insight into Acyl-ACP Thioesterase toward Substrate Specificity Design
酰基 ACP 硫酯酶的结构洞察以实现底物特异性设计
DOI:10.1021/acschembio.7b00641
发表时间:2017-11-01
期刊:ACS CHEMICAL BIOLOGY
影响因子:4
作者:Feng, Yanbin;Wang, Yayue;Xue, Song
通讯作者:Xue, Song
DOI:10.3389/fpls.2017.01503
发表时间:2017
期刊:Frontiers in plant science
影响因子:5.6
作者:Yang M;Jiang JP;Xie X;Chu YD;Fan Y;Cao XP;Xue S;Chi ZY
通讯作者:Chi ZY
DOI:10.1186/s13068-018-1160-6
发表时间:2018
期刊:Biotechnology for biofuels
影响因子:6.3
作者:Zhu Z;Yuan G;Fan X;Fan Y;Yang M;Yin Y;Liu J;Liu Y;Cao X;Tian J;Xue S
通讯作者:Xue S
莱茵衣藻中生长偶联嵌合RbcS2-cTP表达系统构建及其调控机制研究
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海外基金