先天性心脏病易感染色体区域5q35.2的候选基因HIGD2A的功能鉴定

批准号:
32000451
项目类别:
青年科学基金项目
资助金额:
24.0 万元
负责人:
初国铭
依托单位:
学科分类:
基因表达及非编码序列调控
结题年份:
2023
批准年份:
2020
项目状态:
已结题
项目参与者:
初国铭
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中文摘要
先心病是发病率最高的出生缺陷病种,遗传因素和环境因素均可致病。我们前期根据本实验室CNV检测数据,检索文献及DECIPHER数据库发现5q35.2-35.3可能是先心病的易感区域,然而目前尚无该区域致病基因鉴定的研究。我们前期通过eQTL分析,整合基因表达及表观调控等生物信息学分析数据,筛选出候选基因HIGD2A,进一步通过生物信息学预测和预实验初步证实HIGD2A基因启动子区SNP rs3172921所在区域可能是AP-2α调控其表达的作用靶点。本项目拟进一步通过分子生物学-细胞生物学-实验动物学的研究路线,从功能鉴定到机能验证,从细胞模型到动物模型,围绕HIGD2A基因功能及表达调控展开一系列研究,阐述HIGD2A基因参与心脏发育的过程及其异常表达导致先心病的致病机理,为先心病的预防和诊断奠定一定的理论基础,也为类似遗传病的基因鉴定、精准诊断和治疗提供一个新思路。
英文摘要
CHD (Congenital Heart Disease) is the most common type of birth defect. Causes of CHD are often partitioned into genetic and environmental categories. Previously, Based on the CNV test data from our laboratory, as well as results from literature and the DECIPHER database, 5q35.2-35.3 was considered to be a susceptible chromosomal region for CHD. However, none pathogenic genes within this region was identified so far. With eQTL (expression Quantitative Trait Loci) analysis to integrate bioinformatics analysis data such as gene expression and epigenetic regulation, HIGD2A was screened as an candidate gene of CHD. It was further confirmed by bioinformatics prediction and preliminary experiments that SNP rs3172921 located in the promoter of HIGD2A may be the target of AP-2α, which modulating the transcription of HIGD2A. This project aims to deeply elucidate the function of HIGD2A gene in cardiac development and pathogenesis of CHD through a series of researches in cell model to animal model according to the route of molecular biology-cell biology-experimental zoology. The results would lay a certain theoretical foundation for the prevention and diagnosis of CHD, and also provide a new idea for the genetic identification, accurate diagnosis and treatment of similar genetic diseases.
期刊论文列表
专著列表
科研奖励列表
会议论文列表
专利列表
Mutation spectrum of Kallmann syndrome: identification of five novel mutations across ANOS1 and FGFR1.
卡尔曼综合征的突变谱:识别 ANOS1 和 FGFR1 的五种新突变。
DOI:10.1186/s12958-023-01074-w
发表时间:2023-03-01
期刊:Reproductive biology and endocrinology : RB&E
影响因子:--
作者:
通讯作者:
DOI:10.3389/fmed.2022.883565
发表时间:2022
期刊:FRONTIERS IN MEDICINE
影响因子:3.9
作者:Chu, Guoming;Li, Pingping;Wen, Juan;Zheng, Gaoyan;Zhao, Yanyan;He, Rong
通讯作者:He, Rong
Phenotype and genetic characteristics in 20 Chinese patients with 46,XY disorders of sex development
DOI:10.1007/s40618-023-02020-8
发表时间:2023-02-06
期刊:JOURNAL OF ENDOCRINOLOGICAL INVESTIGATION
影响因子:5.4
作者:Zheng,G. Y.;Chu,G. M.;He,R.
通讯作者:He,R.
国内基金
海外基金
