课题基金基金详情
肾透明细胞癌中甲基化沉默的长链非编码RNA BRE-AS1通过HNRNPU/GADD45A途径调控启动子去甲基化过程
结题报告
批准号:
81802542
项目类别:
青年科学基金项目
资助金额:
21.0 万元
负责人:
石润林
依托单位:
学科分类:
H1805.肿瘤表观遗传
结题年份:
2021
批准年份:
2018
项目状态:
已结题
项目参与者:
周辉、余淦、陈科、严立斌、刘浩然、曾瑾、张杨军
国基评审专家1V1指导 中标率高出同行96.8%
结合最新热点,提供专业选题建议
深度指导申报书撰写,确保创新可行
指导项目中标800+,快速提高中标率
客服二维码
微信扫码咨询
中文摘要
LncRNA及其表观遗传学调控在人类肿瘤发生发展中发挥重要调节功能。通过LncRNA启动子甲基化芯片以及LncRNA表达谱芯片的联合分析,筛选出了同时发生异常甲基化和异常表达的LncRNA,并选取BRE-AS1进一步研究。其在肾癌中显著低表达且受启动子甲基化调控。体内外实验证实了其在肾癌中起肿瘤抑制作用。随后CLIP数据及RNA免疫沉淀,验证出其与HNRNPU结合,且HNRNPU与GADD45A存在表达及功能相关。因此提出假说,BRE-AS1在肾透明细胞癌中高甲基化表达,其能够通过RNA结合蛋白HNRNPU的桥接作用,调控GADD45A的表达,而GADD45A又能够影响碱基断裂修复相关的启动子去甲基化过程,导致下游基因如BABAM2表达异常,从而调控肾癌的发生发展。本项目拟阐明BRE-AS1通过HNRNPU调节GADD45A相关通路在肾癌发生发展中的分子机制,加深对肾癌相关分子事件的认识。
英文摘要
Long noncoding RNAs (lncRNAs) have been documented as playing critical role in the development and progression of human cancers including renal cell carcinoma (RCC), while the epigenetic regulation of lncRNAs are also widely studied. Our integrated analysis of lncRNA promoter methylation sequencing and lncRNA expression profile analysis identified a series of lncRNA with both aberrant expression and abnormal promoter methylation status in RCC. In order to validate our results, we selected a novel lncRNA BRE-AS1 which was significantly downregulated in ccRCC and exhibited hypermethylation status in promoter region. The expression pattern and methylation regulation were proved with further studies, and a series of in vitro and in vivo experiments validated that BRE-AS1 could act as an tumor suppressive transcript. Furthermore, crosslinking-immunprecipitation and high-throughputsequencing (CLIP-seq) data and our subsequent RNA immunoprecipitation identified HNRNPU as a RNA binding protein of BRE-AS1, and there was a significant expression and functional correlation between HNRNPU and GADD45A. All these results contributed to the hypothesis that methylation-silenced BRE-AS1 might regulate the GADD45A expression and base break repair associated promoter demethylation pathway through its RNA binding protein HNRNPU, thus participating in the carcinogenesis of RCC. This project aims to elaborate the molecular mechanisms that how BRE-AS1 affects the pivotal GADD45A-associated promoter demethylation pathway in RCC via interaction of HNRNPU and GADD45A. This project has the potential to broaden and deepen our understanding of RCC-associated molecular events and provides promising diagnostic and therapeutic targets for RCC.
LncRNA及其表观遗传学调控在人类肿瘤发生发展中发挥重要调节功能。通过LncRNA启动子甲基化芯片以及LncRNA表达谱芯片的联合分析,筛选出了同时发生异常甲基化和异常表达的LncRNA,并选取BRE-AS1进一步研究。其在肾癌中显著低表达且受启动子甲基化调控。体内外实验证实了其在肾癌中起肿瘤抑制作用。随后CLIP数据及RNA免疫沉淀,验证出其与HNRNPU结合,且HNRNPU与GADD45A存在表达及功能相关。通过实验结果表明:①BRE-AS1 因为启动子 CpG 区域高甲基化从而在肾癌中显著低表达,并在肾细胞癌发生发展中起着抑癌基因的作用; ②BRE-AS1 可调控 BABAM2 的表达水平,其可能机制为 BRE-AS1可能通过 RNA 结合蛋白 HNRNPU 的介导与GADD45A 发生相互作用,由于BRE 激活 BABAM2(BRE)的表达,从而共同在肾细胞癌中发挥抑癌作用。本项目阐明BRE-AS1通过HNRNPU调节GADD45A相关通路在肾癌发生发展中的分子机制,加深了对肾癌相关分子事件的认识。
期刊论文列表
专著列表
科研奖励列表
会议论文列表
专利列表
DOI:10.3389/fmolb.2021.626328
发表时间:2021
期刊:Frontiers in molecular biosciences
影响因子:5
作者:Sun G;Ge Y;Zhang Y;Yan L;Wu X;Ouyang W;Wang Z;Ding B;Zhang Y;Long G;Liu M;Shi R;Zhou H;Chen Z;Ye Z
通讯作者:Ye Z
国内基金
海外基金