3’UTR上的二级结构元件介导PD-1转录后调控的分子机制研究

批准号:
31971224
项目类别:
面上项目
资助金额:
58.0 万元
负责人:
赵文学
依托单位:
学科分类:
核酸生物化学
结题年份:
2023
批准年份:
2019
项目状态:
已结题
项目参与者:
赵文学
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中文摘要
PD-1是调节肿瘤和免疫的关键蛋白之一,然而目前对其表达调控的分子机制尚不完全清楚,这阻碍了对肿瘤发生和肿瘤免疫机制的认识。我们最近的前期实验结果显示,PD-1 mRNA的3’UTR对基因表达有强烈的抑制作用。进一步研究发现它能在转录后水平显著促进mRNA降解,而其调节活性依赖于3’UTR上一个特殊的茎环二级结构。为进一步阐明其分子作用机制,本项目拟采用生物信息分析、Aptamer亲和纯化等方法鉴定与茎环结构元件相互作用的RNA结合蛋白(RBP);然后利用基因敲除、荧光报告实验、流式细胞分析等手段弄清RBP与结构元件相互作用对PD-1 mRNA降解速率和蛋白水平、以及对细胞增殖的影响和机制;进一步将采用Co-IP等方法揭示RBP招募去腺苷酸酶以去除polyA尾巴而加速mRNA降解的过程。该研究有望加深对基因表达调控复杂性的认识,揭示PD-1表达调控的新机制,为探索肿瘤治疗的新策略提供基础。
英文摘要
PD-1 is a crucial protein for regulation of tumorigenesis and immunity. However, the mechanism on which the PD-1 expression is regulated remains largely unknown, which is hindering us from understanding how T cells and cancer cells are mechanistically regulated. We recently used a fluorescence reporter assay to demonstrate that the 3’UTR of PD-1 mRNA possesses strong activity in inhibition of PD-1 expression, which was further supported by the results from a CRISPR based in vivo assay. Additionally, we found that the 3’UTR regulated gene expression at post-transcriptional level by destabilizing mRNA. Truncation test showed that the destabilizing activity of PD-1 3’UTR depended on a specific region that can form a secondary step-loop structure. To elucidate the molecular mechanism on which the step-loop structure contributes to the 3’UTR regulatory activity, we plan to use bioinformatic analysis and Aptamer affinity purification to identify the RNA binding protein (RBP) that interacts with the stem-loop structure. Next we will study the effect of the interaction between RBP and the stem-loop structure on PD-1 mRNA degradation, protein output, and cellular proliferation by using a set of methods including gene knock-out, fluorescence reporter assay, and flow cytometric analysis. Further, we will utilize Co-IP method to reveal the process where the RBP recruits the deadenylase complex that hypothetically removes the polyA tail from mRNA and accelerates mRNA degradation. We expect that this study would deepen our understanding of the complexity of gene expression regulation, and reveal a new mechanism for regulating PD-1 expression, which could potentially provide new options for developing new methods for cancer treatment.
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DOI:10.31857/S0026898422030181
发表时间:2022
期刊:Molecular Biology
影响因子:--
作者:L Wang;R Li;X Lai;X Zhang;H Chen;W Zhao
通讯作者:W Zhao
DOI:10.1038/s42003-023-04922-y
发表时间:2023-05-18
期刊:COMMUNICATIONS BIOLOGY
影响因子:5.9
作者:Lai, Xiaoqian;Li, Rong;Wang, Panpan;Li, Meng;Xiao, Chenxi;Cao, Qiang;Li, Xin;Zhao, Wenxue
通讯作者:Zhao, Wenxue
DOI:10.1021/acssynbio.3c00287
发表时间:2023
期刊:ACS Synthetic Biology
影响因子:4.7
作者:Meng Li;Dan Li;Leiruo Lin;Panpan Wang;Wenxue Zhao
通讯作者:Wenxue Zhao
新型mRNA稳定性调控元件的作用机制研究及其在mRNA疫苗中的应用
- 批准号:--
- 项目类别:省市级项目
- 资助金额:15.0万元
- 批准年份:2024
- 负责人:赵文学
- 依托单位:
急性白血病T淋巴细胞mRNA-m6A甲基化修饰的鉴定与功能研究
- 批准号:--
- 项目类别:省市级项目
- 资助金额:10.0万元
- 批准年份:2021
- 负责人:赵文学
- 依托单位:
国内基金
海外基金
