基于冷冻电镜的组蛋白H3K4甲基转移酶COMPASS复合体的结构与功能研究
结题报告
批准号:
31872714
项目类别:
面上项目
资助金额:
65.0 万元
负责人:
丛尧
学科分类:
C0501.结构生物学
结题年份:
2022
批准年份:
2018
项目状态:
已结题
项目参与者:
丁占玉、王艳兴、王芳芳、洪晓喻
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中文摘要
组蛋白H3第四位赖氨酸(H3K4)三甲基化是转录起始的标志,酵母中该过程由甲基转移酶COMPASS复合体催化完成。该复合体从酵母到人高度保守。人源COMPASS亚基的缺失或突变将引起白血病、肿瘤等诸多人类疾病。COMPASS组成复杂且极具动态性,给结构生物学研究带来极大挑战,至今尚无该复合体完整结构信息。这也极大阻碍了人们对COMPASS复合体的整体构架结构,各亚基如何组装,如何相互协调完成底物核小体识别与结合,进而完成组蛋白H3K4甲基转移酶活性等科学问题的深入理解。本项目将在酵母中超表达并纯化酵母COMPASS复合体,解析完整COMPASS复合体及其结合核小体形成复合体的高分辨率冷冻电镜三维结构,以期揭示其亚基排布方式和相互作用网络,及其识别底物核心核小体并且催化H3K4甲基化的分子机制,为相关白血病或肿瘤等疾病的诊疗提供新思路和靶标。
英文摘要
Methylation of histone H3 lysine 4 (H3K4) is catalyzed by the multi-component COMPASS complex, which is highly conserved from yeast to human, and plays essential roles in gene expression and transcription, cell cycle progression, and DNA repair. COMPASS complex have been the most intensively studied because of its involvement by chromosomal translocations in a variety of acute lymphoidand myeloid leukaemias and several types of human tumours. To identify the structural elements underpinning COMPASS assembly, several crystal structures of the key components and subcomplexes have been determined and provided information about its subunit interaction network. However, due to the lack of the complete structure of COMPASS, the entire spectrum of interactions controlling COMPASS assembly remains unclear, which hinders our understanding of the mechanisms underlying its substrate recognition and H3K4 methylation. We have overexpressed all the seven subunits of COMPASS in yeast, and for the first time, we determined the complete structure of S. ceravisa COMPASS by cryo-EM. By utilizing the emerging powerful cryo-EM technique, the research objectives include: To determine the high resolution structure of complete yeast COMPASS complex, reveal the subunit organization and full molecular architecture of yeast COMPASS; to uncover the interaction mechanism of nucleosome core particle with COMPASS complex, and reveal the mechanism of histone H3K4 methylation, which could provide essential structure basis for the diagnosis and treatment of related human diseases.
组蛋白H3第四位赖氨酸(H3K4)甲基化由组蛋白甲基转移酶复合体COMPASS催化完成。该复合体从酵母到人高度保守,人源COMPASS复合体亚基的缺失或突变将引起白血病、肿瘤等人类疾病。COMPASS组成复杂且极具动态性,给结构生物学研究带来极大挑战。至今尚无该复合体的完整结构,限制了对COMPASS复合体的整体构架结构,各亚基如何相互协调识别底物核小体、进而完成组蛋白H3K4甲基转移酶活性机制的理解。本项目研究进展如下:(1)首次解析了完整的酵母COMPASS 复合体的冷冻电镜结构,应用自行发展的复合体亚基标签定位方法结合交联质谱,揭示了COMPASS复合体亚基排布方式及其作用网络(Sci Rep 2018, 见附件,已致谢本项目);通过优化蛋白纯化和制样条件以及数据处理方法,已推进完整COMPASS的较高分辨率冷冻电镜结构解析(文章撰写中)。(2)完成了不同物种及Ub修饰状态的核小体核心颗粒制备,组装并解析了完整COMPASS结合核小体形成复合体的冷冻电镜结构;(3)构建了一系列Set1亚基N端截短的COMPASS复合体表达菌株,及调节亚基外源表达菌株,展开基于结构的生化和功能验证;(4)发展了冷冻电镜亲和载网方法(文章撰写中),便于高效原位纯化完整COMPASS复合体。上述研究为揭示完整COMPASS识别核小体并催化H3K4甲基化的分子机制奠定基础,为相关白血病或肿瘤的诊疗提供新思路。(5)本团队还在新冠病毒及其值得关注突变株的结构及其受体结合机制和抗体发展等课题中取得系列成果(Nature 2022; Nat Commun 2021a,b, 2022a; Sci Advances 2021等)。受本项目资助,在Nature,Mol Cell,Sci Advances,Nat Commun,PNAS,Sci Rep等国际学术期刊发表通讯或共同通讯作者论文12篇。
期刊论文列表
专著列表
科研奖励列表
会议论文列表
专利列表
Cryo-EM of mammalian PA28αβ-iCP immunoproteasome reveals a distinct mechanism of proteasome activation by PA28αβ.
哺乳动物 PA28αβ-iCP 免疫蛋白酶体的冷冻电镜揭示了 PA28αβ 蛋白酶体激活的独特机制
DOI:10.1038/s41467-021-21028-3
发表时间:2021-02-02
期刊:Nature communications
影响因子:16.6
作者:Chen J;Wang Y;Xu C;Chen K;Zhao Q;Wang S;Yin Y;Peng C;Ding Z;Cong Y
通讯作者:Cong Y
Conformational dynamics of the Beta and Kappa SARS-CoV-2 spike proteins and their complexes with ACE2 receptor revealed by cryo-EM.
冷冻电镜揭示 Beta 和 Kappa SARS-CoV-2 刺突蛋白及其与 ACE2 受体复合物的构象动力学
DOI:10.1038/s41467-021-27350-0
发表时间:2021-12-20
期刊:Nature communications
影响因子:16.6
作者:Wang Y;Xu C;Wang Y;Hong Q;Zhang C;Li Z;Xu S;Zuo Q;Liu C;Huang Z;Cong Y
通讯作者:Cong Y
Conformational dynamics of SARS-CoV-2 trimeric spike glycoprotein in complex with receptor ACE2 revealed by cryo-EM
冷冻电镜揭示 SARS-CoV-2 三聚体刺突糖蛋白与受体 ACE2 复合物的构象动力学
DOI:10.1101/2020.06.30.177097
发表时间:2020-06
期刊:Science Advances
影响因子:13.6
作者:Cong Xu;Yanxing Wang;Caixuan Liu;Chao Zhang;Wenyu Han;Xiaoyu Hong;Yifan Wang;Qin Hong;Shutian Wang;Qiaoyu Zhao;Yalei Wang;Yong Yang;Kaijian Chen;Wei Zheng;Liangliang kong;Fangfang Wang;Qinyu Zuo;Zhong Huang;Yao Cong
通讯作者:Yao Cong
Distinct architecture and composition of mouse axonemal radial spoke head revealed by cryo-EM
冷冻电镜揭示小鼠轴丝径向辐条头的独特结构和组成
DOI:10.1073/pnas.2021180118
发表时间:2021-01-26
期刊:PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
影响因子:11.1
作者:Zheng,Wei;Li,Fan;Cong,Yao
通讯作者:Cong,Yao
Structural basis for SARS-CoV-2 Delta variant recognition of ACE2 receptor and broadly neutralizing antibodies.
SARS-CoV-2 Delta 变体识别 ACE2 受体和广泛中和抗体的结构基础
DOI:10.1038/s41467-022-28528-w
发表时间:2022-02-15
期刊:Nature communications
影响因子:16.6
作者:Wang Y;Liu C;Zhang C;Wang Y;Hong Q;Xu S;Li Z;Yang Y;Huang Z;Cong Y
通讯作者:Cong Y
调控纤毛发生及运动的哺乳动物超大分子机器的结构与功能
基于冷冻电镜的真核细胞分子伴侣素TRiC的结构与功能研究
基于超低温冷冻电镜的蛋白酶体结构与功能研究
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