课题基金 / 基金详情

双位点结合型CDC25B-CDK2/CyclinA相互作用调控分子的发现及作用机制研究

批准号:
81603028
项目类别:
青年科学基金项目
资助金额:
17.3 万元
负责人:
宋宇宁
依托单位:
学科分类:
药物设计与药物信息
结题年份:
2019
批准年份:
2016
项目状态:
已结题
项目参与者:
方增军、薛霞、郝国祥、康东伟、李潇、王学顺、王红媛、董馨文、王磊

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中文摘要
细胞分裂周期蛋白CDC25磷酸酶可以去磷酸化CDK/Cyclin复合物从而使其活化,进而调控细胞周期及细胞增殖,是一个极有前途的癌症治疗靶标。本课题为发现全新作用机制的CDC25抑制剂及亚型选择性探针分子,以CDC25B-CDK2/Cyclin A相互作用作为药物设计新靶标,基于CDC25B“泳池”及“热点区域”位点的结构和已有配体的药效团,分别确定各位点优势片段,并实施化学合成,运用CuAAC点击化学高效合成筛选技术,构建含有三唑Linker的双位点结合型片段组合库,经原位抑酶活性及CDC25B-CDK2/Cyclin A相互作用抑制活性(SPR法及AlphaLISA法)筛选发现活性分子;进而分别从分子水平、细胞水平及动物水平对其抑制剂活性及抗肿瘤活性进行评价,并进一步对活性化合物的作用机制及成药性进行探讨,为开发新型CDC25亚型选择性探针分子及精准靶向的抗肿瘤侯选药物奠定基础。
英文摘要
Cell division cycle (CDC) 25 phosphatases are promising targets for anticancer drug discovery as they are key phosphatases regulating cell cycle transition and proliferation via the interactions with CDK/Cyclin complexes. To date, all efforts to inhibit CDC25 phosphatases were focused on targeting the catalytic sites of these enzymes, which are unusually small and shallow without well-defined binding pockets, making CDC25s somewhat recalcitrant to drug discovery efforts. Discovery of bidentate CDC25B-CDK2/Cyclin A interaction modulators provided a more attractive strategy to design novel agents with therapeutic applications, by binding simultaneously in CDC25B “swimming pool” and “remote hotspot region”. Based on these findings, in this project, we propose CuAAC click-chemistry-based combinatorial libraries approach to discover bidentate CDC25B-CDK2/Cyclin A interaction modulators. Based on multiple-filter-based virtual screening, the fragments targeting “swimming pool” and “remote hotspot region” will be identified from a large compound collection respectively, which having a tolerant region (site) to allow attachment of an appropriate linker. The top-ranking binders and favorable linkers will be selected and be dissected into a set of alkyne-/azide-containing fragments. Initially, a library of 240-membered 1,4-triazoles between 10 alkynes and 24 azides is rapidly constructed using CuAAC reaction and tested against CDC25B and CDC25B-CDK2/Cyclin A interaction (in situ screening). From the preliminary inhibition data, the most potent library members will be individually resynthesized in large-scale for complete characterization and further assay of their inhibition activity against CDC25 phosphatases as well as anticancer activities both in vitro and in vivo. Investigations will also be conducted to estimate their ability to induce cell cycle arrest as well as apoptosis. Assays of ROS generation, mitochondrial dysfunction and DNA damage may help to explain the mechanism of action. Moreover, preliminary evaluation of druggability properties will reveal their potential as anticancer drug candidates. The binding modes of selected bioactive compounds will be investigated by molecular simulations. Further modifications and a new round of library design (using other bioorthogonal click reactions) will be performed to obtain second-generation compounds with improved properties. Our approach thus lays the foundation for discovery of “bidentate”-typed modulators with improved CDC25 subtype-selectivity, antitumour activities and favorable druggability.
细胞分裂周期蛋白CDC25磷酸酶可以去磷酸化CDK/Cyclin复合物从而使其活化,进而调控细胞周期及细胞增殖,是一个极有前途的癌症治疗靶标。本课题为发现全新作用机制的CDC25抑制剂及亚型选择性探针分子,以CDC25B-CDK2/Cyclin A相互作用为研究靶标,以能与CDC25B催化位点毗邻的“泳池”位点及远端PPI“热点区域”结合的配体为分子片段,根据多位点抑制剂设计及多样性修饰策略,基于CuAAC点击化学构建优势片段组合库并进行原位筛选。最终构建了含1,2,3-三唑-1,4-萘醌/喹啉二酮基序的化合物库(96个化合物),通过原位靶点活性评价、细胞水平抗肿瘤活性测试、以及初步的药物机制评价,已筛选出靶标选择性好、抗肿瘤活性且成药性显著的先导化合物3个。这三者在体外实验中均表现出了良好的抗肿瘤活性,在多种细胞株中与阳性化合物NSC663284抑制活性相当。尤其是M2N12,表现出了对Cdc25C良好的选择性,通过分子动力学模拟研究,发现M2N12能与Cdc25C形成较Cdc25A/B能量更低、更为稳固的构象。此外,SRB检测结果表明,M2N12对于KB-VIN肿瘤细胞具有较好的抑制效果(IC50 = 6.81 μM),优于阳性对照药物紫杉醇(IC50 = 3145.83 nM),具有进一步开发的价值。进一步研究发现,M2N12可诱导HT-29细胞中的细胞周期阻滞,将细胞阻滞在G2/M期,并可上调凋亡调控因子细胞色素C(Cyto-C)的表达,显著激活Caspase-3及其作用底物PARP,上调其活性形式cleaved-Caspase-3和cleaved-PARP蛋白表达。同时M2N12还增加促凋亡蛋白Bax的表达,降低抗凋亡蛋白Bcl-2的表达,从而诱导肿瘤细胞凋亡。此类化合物的发现为开发新型CDC25亚型选择性探针分子及精准靶向的抗肿瘤侯选药物奠定基础。
期刊论文列表
专著列表
科研奖励列表
会议论文列表
专利列表
Identification of highly potent and selective Cdc25 protein phosphatases inhibitors from miniaturization click-chemistry-based combinatorial libraries
从基于小型化点击化学的组合库中鉴定高效且选择性的 Cdc25 蛋白磷酸酶抑制剂
DOI: 10.1016/j.ejmech.2019.111696
发表时间: 2019-12-01
期刊: EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY
影响因子: 6.7
作者: [Jing, Lanlan, Wu, Gaochan, Zhan, Peng]
通讯作者: Zhan, Peng
Efficient drug discovery by rational lead hybridization based on crystallographic overlay
通过基于晶体学叠加的合理先导杂交实现高效药物发现
DOI: 10.1016/j.drudis.2018.11.021
发表时间: --
期刊: Drug Discov Today
影响因子: --
作者: [Shuo Zhang, Jian Zhang, Ping Gao, Lin Sun, Yuning Song, Dongwei Kang, Xinyong Liu, Peng Zhan]
通讯作者: Peng Zhan
Inhibition of CDC25B With WG-391D Impedes the Tumorigenesis of Ovarian Cancer
用 WG-391D 抑制 CDC25B 可阻止卵巢癌的肿瘤发生
DOI: 10.3389/fonc.2019.00236
发表时间: 2019-04-08
期刊: FRONTIERS IN ONCOLOGY
影响因子: 4.7
作者: [Xiao, Yangjiong, Yu, Yang, Zhang, Rong]
通讯作者: Zhang, Rong
DOI: 10.1080/17460441.2019.1626821
发表时间: 2019
期刊: Expert Opinion on Drug Discovery
影响因子: 6.3
作者: [Hao Xia, Zuo Xiaofang, Kang Dongwei, Zhang Jian, Song Yuning, Liu Xinyong, Zhan Peng]
通讯作者: Zhan Peng
国内基金
海外基金