大麦半矮杆基因ari-e.GP的克隆及其对产量和耐盐性状的影响研究
批准号:
31471495
项目类别:
面上项目
资助金额:
82.0 万元
负责人:
贾巧君
依托单位:
学科分类:
作物基因组及遗传学
结题年份:
2018
批准年份:
2014
项目状态:
已结题
项目参与者:
杨建明、汪军妹、朱靖环、华为、尚毅、陈绍宁、谢思宇、朱斌
中文摘要
半矮杆品种抗倒性强、耐重施肥和高种植密度,有利于高产和机械化收获。ari-e.GP是大麦半矮杆育种的重要基因。携带该基因的品种Golden Promise广泛用于大麦半矮杆育种。除影响株高外,它还与产量、耐盐性相关。该基因已用不同的标记进行定位和QTL分析,但尚未克隆。利用Dash/VB9104DH群体研究发现在ari-e.GP基因区域检测到株高主效QTL,同时检测到产量QTL。随着大麦基因组的公布,可望通过图位克隆法获得ari-e.GP。本研究采用Dash/VB9104 DH群体和Dash×WB2484回交群体精细定位并克隆ari-e.GP,开发基因标记为育种所用。利用Golden Promise进行功能互补试验,阐明ari-e.GP基因的半矮机制。通过对转基因与非转基因大麦的产量和耐盐性试验,进一步揭示ari-e.GP基因对产量和耐盐性的影响。本研究可为大麦半矮杆育种提供理论依据。
英文摘要
Semi-dwarf plants improved harvest index resulted from more resistant to lodging, suitable to heavy fertilizer application and dense field planting. As a result, they increased grain yield and adapted to mechanize harvesting. Some of the semi-dwarf genes have been depolyed in modern barley breeding. ari-e.GP is one of the most important semi-dwarf genes. The famous barley Golden Promise carried ari-e.GP gene are in the pedigree of majority of modern barley cultivars. Besides its effect on reduced height, ari-e.GP also associated with high yield and salt tolerance. The ari-e.GP gene has not yet been cloned althoght it was recently mapped as a height QTL using different kinds of markers. A major QTL for plant height accounts for 40% of the phenotypic variation was mapped to the ari-e.GP gene region in the Dash/VB9104 barley double haploid populattion. Furthermore, a QTL for yield was also identified at the same region. With the available of barley genome sequence, ari-e.GP gene can be isolated from map-based cloning. In this project, ari-e.GP gene will be fine mapped and identifed using Dash/VB9104 double haploid population and Dash/WB2484 backcross population. Gene markers will be developed for marker assited selection of barley. Golden promise was transformated with a construct containing-full length ari-e.GP genomic DNA,confirming that this locus is responsible for the semi-dwarf phenotype. Meanwhile,the transformation and untransformation barley will be determined their yield and response to salt stress, which will demonstrate its association between the semi-dwarf gene and yield and salt tolerance. The outcome of the project will hopefully provide the theoretical basis for barley semi-dwarf breeding.
研究利用混合群体分离法结合SLAF-seq测序技术和鸟枪法测序两种方法开发SNP分子标记和InDel分子标记,对ari-e.GP基因进行了精细定位。根据精细定位结果,发现并克隆了HvDep1基因,该基因为ari-e.GP基因的候选基因。进一步分析发现Golden Promise 突变是由于HvDep1基因的1508和1509位点间(2号外显子)插入A碱基,导致翻译前终止,因此ari-e.GP表现为该基因功能缺失突变。根据ari-e.GP基因的插入A碱基开发了鉴定ari-e.GP基因的dCAPs标记dcDep1。ari-e.GP编码G蛋白γ亚基,其对产量的影响与环境条件相关。研究发现,大麦生育后期雨水较少的环境条件有利于ari-e.GP基因产量的提高。对携带ari-e.GP基因的近等基因系的耐盐性进行了研究,发现该基因对地上部分的耐盐性提高显著,抗氧化酶活性测定结果表明POD和SOD含量显著低于对照,因此携带ari-e.GP近等基因系通过减少体内活性氧的积累调控耐盐生理。
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Marker development using SLAF-seq and whole-genome shotgun strategy to fine-map the semi-dwarf gene ari-e in barley.
使用 SLAF-seq 和全基因组鸟枪策略进行标记开发,以精细绘制大麦中的半矮化基因 ari-e
DOI:
10.1186/s12864-016-3247-4
发表时间:
2016-11-11
期刊:
BMC genomics
影响因子:
4.4
作者:
[Jia Q, Tan C, Wang J, Zhang XQ, Zhu J, Luo H, Yang J, Westcott S, Broughton S, Moody D, Li C]
通讯作者:
Li C
Genetic mapping and molecular marker development for the gene Pre2 controlling purple grains in barley
控制大麦紫色籽粒的基因 Pre2 的遗传图谱和分子标记开发
DOI:
10.1007/s10681-015-1593-y
发表时间:
2016-03-01
期刊:
EUPHYTICA
影响因子:
1.9
作者:
[Jia, Qiaojun, Zhu, Jinghuan, Zhang, Guoping]
通讯作者:
Zhang, Guoping
Toward Identification of Black Lemma and Pericarp Gene Blp1 in Barley Combining Bulked Segregant Analysis and Specific-Locus Amplified Fragment Sequencing.
结合批量分离分析和特定位点扩增片段测序,鉴定大麦中的黑外稃和果皮基因 Blp1
DOI:
10.3389/fpls.2017.01414
发表时间:
2017
期刊:
Frontiers in plant science
影响因子:
5.6
作者:
[Jia Q, Wang J, Zhu J, Hua W, Shang Y, Yang J, Liang Z]
通讯作者:
Liang Z
Molecular characterization and functional analysis of barley semi-dwarf mutant Riso no. 9265.
大麦半矮化突变体Riso no.的分子表征及功能分析
DOI:
10.1186/s12864-015-2116-x
发表时间:
2015-11-14
期刊:
BMC genomics
影响因子:
4.4
作者:
[Jia Q, Li C, Shang Y, Zhu J, Hua W, Wang J, Yang J, Zhang G]
通讯作者:
Zhang G
国内基金
海外基金