MRI: Acquisition of a High Performance Hybrid Computer Cluster for Computational Modeling
MRI: Acquisition of a High Performance Hybrid Computer Cluster for Computational Modeling
批准号:
2117247
负责人:
Thomas Cundari
金额:
$68.64万
依托单位国家:
美国
项目类别:
Standard Grant
财政年份:
2021
资助国家:
美国
项目状态:
已结题
起止时间:
2021-10-01 至 2024-09-30
中文摘要
该项目将允许购买、安装和操作一种名为CRUNTCH4的新型高性能计算(HPC)资源,该资源将部署在北德克萨斯大学(UNT)高级科学计算和建模中心(CASCaM)。这种急需的高性能计算资源结合了不同的计算架构和大量的数据存储,所有这些都通过高速通信结构连接起来。该计算资源将为CASCaM研究人员提供继续研究广泛主题的手段,包括量子化学,材料设计,生物分子模拟,基于机器学习的化学发现和生物信息学等。CASCaM拥有一个强大的计算建模程序,由计算和实验研究人员组成,涉及在跨学科环境中开发和应用计算工具,包括化学,物理,生物,材料科学和工程。UNT的CASCaM项目非常重视早期职业科学家(博士,本科生和高中生)的研究和研究培训。CASCaM的研究人员包括40%的女性和20%的少数民族。此外,UNT化学拥有运行时间最长的NSF-REU夏季化学学者项目之一,许多参与者使用CASCaM计算资源。HPC资源设计和能力将使当前和未来的CASCaM研究人员能够进行最先进的模拟,解决各种重要的科学问题。CRUNTCH4的混合架构是由一个54节点的高性能计算系统与一个高速互连的大型存储设备和中期备份存储设备耦合而成。该系统由43个Intel Xeon通用CPU节点(36核,196gb mem/节点)、7个Nvidia Ampere GPU节点(4个GPU/节点,NVLink)、2个大内存CPU节点(48核,1.5 TB mem/节点)、2个管理节点、1个1pb ExaScaler网络附加存储(NAS)和1个670 TB块存储阵列节点组成,全部通过HDR100 InfiniBand网络连接,峰值理论性能超过484 TFLOPS。该资源的异构架构将使广泛的科学主题的调查,包括高级量子化学,混合量子力学/分子力学,材料设计,生物分子模拟,生物信息学,基于机器学习的化学发现,仅举几例。在中国科学院的职业经历和研究课题的多样性创造了一个令人振奋的科学环境,因此,设备在不同的科学领域和职业阶段的影响将是巨大的。该奖项反映了美国国家科学基金会的法定使命,并通过使用基金会的知识价值和更广泛的影响审查标准进行评估,被认为值得支持。
英文摘要
This project will permit the purchase, installation, and operation of a new high-performance computing (HPC) resource, called CRUNTCH4, to be deployed at the University of North Texas’ (UNT) Center for Advanced Scientific Computing and Modeling (CASCaM). This much needed HPC resource combines different computing architectures and significant amounts of data storage, all connected via a high-speed communications fabric. This computing resource will provide the means for CASCaM investigators to continue research on a broad range of topics including quantum chemistry, materials design, biomolecular simulations, machine-learning based chemical discovery, and bioinformatics, among others. CASCaM hosts a robust computational modeling program composed of computational and experimental researchers involving development and application of computational tools in an interdisciplinary environment encompassing Chemistry, Physics, Biology, Materials Science and Engineering. UNT’s CASCaM program has a strong emphasis on research and research training of early career scientists – Ph.D., undergraduate, and high school students. The CASCaM researchers comprise 40% women and 20% minoritized peoples. Additionally, UNT Chemistry has one of the longest-running NSF-REU summer scholar programs in Chemistry, with many participants using CASCaM computing resources. The HPC resource design and capabilities will enable current and future CASCaM researchers to conduct state-of-the-art simulations, addressing a diverse array of important scientific problems. The hybrid architecture of CRUNTCH4 is composed of a 54-node HPC system coupled to a large storage device and medium-term backup storage device with high-speed interconnects. This system comprises 43 general purpose Intel Xeon CPU nodes (36 core, 196 GB mem/node), 7 Nvidia Ampere graphics processing unity (GPU) nodes (4 GPU/node with NVLink), 2 large memory CPU nodes (48 core,1.5 TB mem/node), two administration nodes, one 1 PB ExaScaler Network-attached Storage (NAS), and one 670 TB block storage array node, all connected via HDR100 InfiniBand fabric, resulting in over 484 TFLOPS of peak theoretical performance. The heterogeneous architecture of this resource will enable the investigation of a broad range of scientific topics, including high-level quantum chemistry, hybrid quantum mechanics/molecular mechanics, materials design, biomolecular simulations, bioinformatics, machine-learning based chemical discovery, to name a few. The diversity of career experience and research topics in CASCaM makes for an exhilarating scientific environment, and thus the impact of the equipment across different scientific fields and career stages will be tremendous.This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.
期刊论文(6)
专著(0)
科研奖励(0)
会议论文
DOI:
10.1021/acs.jpcb.3c00986
发表时间:
2023-06
期刊:
The journal of physical chemistry. B
影响因子:
--
作者:
[José Enrique Vázquez-Cervantes;G. Cisneros]
通讯作者:
José Enrique Vázquez-Cervantes;G. Cisneros
DOI:
10.1021/acscatal.3c01245
发表时间:
2023-04
期刊:
ACS catalysis
影响因子:
12.9
作者:
[Yazdan Maghsoud;Chao Dong;G. Cisneros]
通讯作者:
Yazdan Maghsoud;Chao Dong;G. Cisneros
DOI:
10.1021/acs.jctc.2c00497
发表时间:
2022-07-12
期刊:
JOURNAL OF CHEMICAL THEORY AND COMPUTATION
影响因子:
5.5
作者:
[Mondragon-Solorzano, Gustavo, Sandoval-Lira, Jacinto, Nochebuena, Jorge, Cisneros, G. Andres, Barroso-Flores, Joaquin]
通讯作者:
Barroso-Flores, Joaquin
Fundamental Acid/Base Properties of Hydrocarbon Carbon-Hydrogen (C-H) Bonds and Metal-Element Active Sites
-
批准号:1953547
-
项目类别:Standard Grant
-
资助金额:$37.59万
-
财政年份:2020
-
负责人:Thomas Cundari
-
依托单位:
MRI: Acquisition of a Computer Cluster for the Computational Chemistry Program at the University of North Texas
-
批准号:1531468
-
项目类别:Standard Grant
-
资助金额:$40.0万
-
财政年份:2015
-
负责人:Thomas Cundari
-
依托单位:
Earth-abundant Metal Catalysts for the Functionalization of Strong Carbon-Hydrogen Bonds
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批准号:1464943
-
项目类别:Standard Grant
-
资助金额:$36.19万
-
财政年份:2015
-
负责人:Thomas Cundari
-
依托单位:
Modeling of Catalytic Bond Functionalization by Base and Noble Metal Catalysts
-
批准号:1057785
-
项目类别:Continuing Grant
-
资助金额:$33.0万
-
财政年份:2011
-
负责人:Thomas Cundari
-
依托单位:
Structure and Reactivity of Low Coordination Transition Metal Complexes
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批准号:0701247
-
项目类别:Continuing Grant
-
资助金额:$27.0万
-
财政年份:2007
-
负责人:Thomas Cundari
-
依托单位:
Computational Studies of Inorganic and Organometallic Complexes and Catalysts
-
批准号:0309811
-
项目类别:Continuing Grant
-
资助金额:$9.9万
-
财政年份:2002
-
负责人:Thomas Cundari
-
依托单位:
U.S.-Romanian Research on Soft Computing Approaches to Modeling Metal Chemistry for Catalysis Applications
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批准号:0308637
-
项目类别:Standard Grant
-
资助金额:$1.85万
-
财政年份:2002
-
负责人:Thomas Cundari
-
依托单位:
US-India Cooperative Research: Novel Approaches to Quantum Modeling of Chemical Systems
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批准号:0308804
-
项目类别:Standard Grant
-
资助金额:$1.19万
-
财政年份:2002
-
负责人:Thomas Cundari
-
依托单位:
US-India Cooperative Research: Novel Approaches to Quantum Modeling of Chemical Systems
-
批准号:0115311
-
项目类别:Standard Grant
-
资助金额:$2.5万
-
财政年份:2001
-
负责人:Thomas Cundari
-
依托单位:
Computational Studies of Inorganic and Organometallic Complexes and Catalysts
-
批准号:9983665
-
项目类别:Continuing Grant
-
资助金额:$17.0万
-
财政年份:2000
-
负责人:Thomas Cundari
-
依托单位:
Research Experiences for Undergraduates in Chemistry at the University of Memphis
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批准号:9987775
-
项目类别:Continuing Grant
-
资助金额:$9.81万
-
财政年份:2000
-
负责人:Thomas Cundari
-
依托单位:
U.S.-Romanian Research on Soft Computing Approaches to Modeling Metal Chemistry for Catalysis Applications
-
批准号:0077531
-
项目类别:Standard Grant
-
资助金额:$4.46万
-
财政年份:2000
-
负责人:Thomas Cundari
-
依托单位:
U.S.-United Kingdom Cooperative Research: Theory-Experiment Study of Transition Metal/C-H Bond Interactions
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批准号:9802675
-
项目类别:Standard Grant
-
资助金额:$0.49万
-
财政年份:1998
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负责人:Thomas Cundari
-
依托单位:
Computational Studies of Transition Metal Bonding and Reactivity
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批准号:9614346
-
项目类别:Standard Grant
-
资助金额:$18.0万
-
财政年份:1997
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负责人:Thomas Cundari
-
依托单位:
Renovation of J. M. Smith Chemistry Building at the University of Memphis
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批准号:9602656
-
项目类别:Standard Grant
-
资助金额:$10.6万
-
财政年份:1996
-
负责人:Thomas Cundari
-
依托单位:
Towards Computer-Aided Catalyst Design: Five Effective Core Potential Studies of C-H Activation
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批准号:9314732
-
项目类别:Continuing Grant
-
资助金额:$12.4万
-
财政年份:1994
-
负责人:Thomas Cundari
-
依托单位:
海外基金