Characterization of a 5-formylcytosine chromocenter in Xenopus embryos
Characterization of a 5-formylcytosine chromocenter in Xenopus embryos
批准号:
354741800
负责人:
Professor Dr. Christof Niehrs, Ph.D.
金额:
$0.0万
依托单位国家:
德国
项目类别:
Research Grants
财政年份:
2017
资助国家:
德国
项目状态:
已结题
起止时间:
2016-12-31 至 2020-12-31
中文摘要
DNA甲基化是一种表观遗传标记,在发育和疾病中起重要作用。现在普遍认为DNA甲基化是动态的,并且受到酶促去甲基化的影响。甲基胞嘧啶双加氧酶的泰特家族将5-甲基胞嘧啶转化为氧化衍生物,其是活性DNA去甲基化的中间体,但其本身也可以作为表观遗传标记起作用。然而,很少有人知道氧化胞嘧啶衍生物作为表观遗传标记的功能,以及它们在脊椎动物发育中的作用。我们已经发现,早期非洲爪蟾胚胎显示5-甲酰胞嘧啶(5 fC)的单核灶在中囊胚过渡。我们有证据表明,这些5 fC色心是由位于不同染色体上的重复DNA序列组成的,这些序列在界面期间合并。我们现在提出的性质,功能,和一个可能的生物学作用,这5 fC色心在非洲爪蟾的发展。
英文摘要
DNA methylation is an epigenetic mark, which plays important roles in development and disease. It is now widely accepted that DNA methylation is dynamic and is subject to enzymatic demethylation. The Tet family of methylcytosine dioxygenases convert 5-methylcytosine to oxidized derivatives, which are intermediates towards active DNA demethylation, but which may also function as epigenetic marks in their own right. However, little is known about the function of oxidized cytosine derivatives as epigenetic marks and as to their role in vertebrate development. We have discovered that early Xenopus embryos display single nuclear foci of 5-formylcytosine (5fC) during the midblastula transition. We have evidence that these 5fC chromocenters are made up of repetitive DNA sequences residing on different chromosomes, which coalesce during interface. We now propose to characterize the nature, the function, and a possible biological role of this 5fC chromocenter in Xenopus development.
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DOI:
10.1101/gad.325696.119
发表时间:
2019-06
期刊:
Genes & Development
影响因子:
10.5
作者:
[Katrin M. Schüle;Manuel Leichsenring;Tommaso Andreani;Viviana Vastolo;Medhavi Mallick;M. Musheev;Emil Karaulanov;C. Niehrs]
通讯作者:
Katrin M. Schüle;Manuel Leichsenring;Tommaso Andreani;Viviana Vastolo;Medhavi Mallick;M. Musheev;Emil Karaulanov;C. Niehrs
DOI:
10.7554/elife.51248
发表时间:
2020-01-14
期刊:
ELIFE
影响因子:
7.7
作者:
[Chang, Ling-Shih, Kim, Minseong, Niehrs, Christof]
通讯作者:
Niehrs, Christof
DOI:
10.1038/s41588-018-0306-6
发表时间:
2019-02-01
期刊:
NATURE GENETICS
影响因子:
30.8
作者:
[Arab, Khelifa, Karaulanov, Emil, Niehrs, Christof]
通讯作者:
Niehrs, Christof
DOI:
10.7554/elife.49044
发表时间:
2019-09-30
期刊:
ELIFE
影响因子:
7.7
作者:
[Han, Dandan, Schomacher, Lars, Niehrs, Christof]
通讯作者:
Niehrs, Christof
DOI:
10.1038/s41589-020-0504-2
发表时间:
2020-03-23
期刊:
NATURE CHEMICAL BIOLOGY
影响因子:
14.8
作者:
[Musheev, Michael U., Baumgaertner, Anne, Niehrs, Christof]
通讯作者:
Niehrs, Christof
Role of NEIL DNA glycosylases in DNA demethylation and differentiation
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批准号:319444698
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项目类别:Research Grants
-
资助金额:$0.0万
-
财政年份:2016
-
负责人:Professor Dr. Christof Niehrs, Ph.D.
-
依托单位:
Roles and mechanisms of asymmetric LRP6 localization in Xenopus embryonic cells
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批准号:214902591
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项目类别:Research Units
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资助金额:$0.0万
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财政年份:2012
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负责人:Professor Dr. Christof Niehrs, Ph.D.
-
依托单位:
Role of Gadd45 in pluripotency and murine embryogenesis
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批准号:64735175
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项目类别:Priority Programmes
-
资助金额:$0.0万
-
财政年份:2008
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负责人:Professor Dr. Christof Niehrs, Ph.D.
-
依托单位:
System level analysis of the BMP4 synexpression groups
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批准号:5403306
-
项目类别:Research Grants
-
资助金额:$0.0万
-
财政年份:2003
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负责人:Professor Dr. Christof Niehrs, Ph.D.
-
依托单位:
Analyse der Genregulation in Synexpressionsgruppen
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批准号:5185846
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项目类别:Research Grants
-
资助金额:$0.0万
-
财政年份:2002
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负责人:Professor Dr. Christof Niehrs, Ph.D.
-
依托单位:
Die biologische Rolle und der Wirkungsmechanismus von R-sponding2
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批准号:5343057
-
项目类别:Research Grants
-
资助金额:$0.0万
-
财政年份:2001
-
负责人:Professor Dr. Christof Niehrs, Ph.D.
-
依托单位:
Analyse der Genregulation in Synexpressionsgruppen
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批准号:5185848
-
项目类别:Priority Programmes
-
资助金额:$0.0万
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财政年份:1999
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负责人:Professor Dr. Christof Niehrs, Ph.D.
-
依托单位:
Systematische Analyse embryonaler Genexpression in Xenopus
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批准号:5377499
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项目类别:Priority Programmes
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资助金额:$0.0万
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财政年份:1997
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负责人:Professor Dr. Christof Niehrs, Ph.D.
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依托单位:
海外基金