课题基金 / 基金详情

Development of quantitative multiplex DNA amplification method by loop-mediated isothermal amplification (LAMP) using Qprobe.

Development of quantitative multiplex DNA amplification method by loop-mediated isothermal amplification (LAMP) using Qprobe.
使用 Qpr​​obe 通过环介导等温扩增 (LAMP) 开发定量多重 DNA 扩增方法。
批准号:
22590539
负责人:
IHIRA Masaru
金额:
$2.91万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (C)
财政年份:
2010
资助国家:
日本
项目状态:
已结题
起止时间:
2010 至 2012

项目摘要

项目成果

IHIRA Masaru的其他基金

相似基金

相关文献

中文摘要
翻译
环介导等温扩增法(LAMP)具有高特异性、高效率和快速扩增DNA的特点。然而,与实时PCR相比,LAMP在目标DNA的定量方面是不够的。在本研究中,我们建立了HSV-1和HSV-2的定量LAMP检测方法,该方法通过特定位置的染料和鸟嘌呤碱基之间的电子转移来猝灭。在单复合反应中,定量lamp在15min内扩增HSV DNA。该方法对HSV-1和HSV-2具有较高的灵敏度和重复性。然而,不可能确定一个最佳条件的多重放大。此外,我们还评价了一种利用Qprobe分子筛选抗GCV的HHV-6B的新方法。新方法的结果与直接测序的结果一致。序列特异性DNA-RNA嵌合探针(循环探针)也是检测SNP的合适方法。LAMP与循环探针的结合可能是定量分析的好工具。首先,建立了实时PCR和循环探针相结合的VZV野生型和oka疫苗株的定量检测方法。
英文摘要
The loop-mediate isothermal amplification method (LAMP) amplifies DNA with high specificity efficiency, and speed. However, the LAMP is insufficient for quantification of target DNA in comparison to the real-time PCR. In this study, we developed quantitative LAMP assay for HSV-1 and HSV-2 by Qprobe, which is quenched via electron transfer between the dye and guanine base at particular position. In singleplex reaction, the quantitative LAMPs amplified HSV DNA within 15min. The quantitative LAMP for HSV-1 and HSV-2 had high sensitivity and reproducible. However, it was impossible to determine an optimal condition for multiplex amplification. In addition, a new molecular method by using Qprobe was evaluated for screening of GCV resistant HHV-6B. The results of the new molecular method were consistent with those of the direct sequence. The sequence-specific DNA-RNA chimeric probe (cycling probe) is also appropriate method for the detection of SNP. The combination of LAMP and cycling probe might be good tool for quantitative analysis. As the first step, we developed quantitative assay combine real-time PCR with cycling probe to discriminate wild type and Oka-vaccine strain of VZV.
期刊论文(0)
专著(0)
科研奖励(0)
会议论文
Host factors associated with the kinetics of EBV DNA load in patients with primary EBV infection.
与原发性 EBV 感染患者 EBV DNA 载量动力学相关的宿主因素。
DOI: --
发表时间: 2011
期刊: Microbiol Immunol.
影响因子: --
作者: [Nakai H, Kawamura Y, Sugata K, Sugiyama H, Enomoto Y, Asano Y, Ihira M, Ohashi M, Kato T, Yoshikawa T.]
通讯作者: Yoshikawa T.
DOI: --
发表时间: 2011
期刊:
影响因子: --
作者: [M.Ihira]
通讯作者: M.Ihira
DOI: 10.1016/j.jcv.2011.02.002
发表时间: 2011-05-01
期刊: JOURNAL OF CLINICAL VIROLOGY
影响因子: 8.8
作者: [Kawamura, Yoshiki, Sugata, Ken, Yoshikawa, Tetsushi]
通讯作者: Yoshikawa, Tetsushi
DOI: 10.1111/j.1348-0421.2012.00489.x
发表时间: 2012-09-01
期刊: MICROBIOLOGY AND IMMUNOLOGY
影响因子: 2.6
作者: [Matsumoto, Yuji, Kawamura, Yoshiki, Yoshikawa, Tetsushi]
通讯作者: Yoshikawa, Tetsushi
共 36 条
    Development of quantitative method by loop-mediated isothermal amplification (LAMP) using cycling probe.
    • 批准号:
      25460705
    • 项目类别:
      Grant-in-Aid for Scientific Research (C)
    • 资助金额:
      $3.24万
    • 财政年份:
      2013
    • 负责人:
      IHIRA Masaru
    • 依托单位:
    Development of a novel DNA amplification methods by loop-mediated isothermal amplification in human herpesvirus infections.
    海外基金