Cell Specificity of the Human Heroin Epigenome
Cell Specificity of the Human Heroin Epigenome
批准号:
10159879
负责人:
STELLA DRACHEVA
金额:
$53.82万
依托单位国家:
美国
项目类别:
财政年份:
2017
资助国家:
美国
项目状态:
已结题
起止时间:
2017-09-15 至 2023-05-31
关键词:
AcetylationAdultAnimal ModelAnimalsAstrocytesAutopsyBehaviorBehavioralBrainBrain MappingBrain regionBrain-Derived Neurotrophic FactorCell NucleusCellsCessation of lifeChIP-seqChromatinCommunitiesControl AnimalDNA MethylationDataData SetDevelopmentDown-RegulationDrug AddictionDrug ExposureEnhancersEpidemicEpigenetic ProcessExposure toFunctional disorderGene ExpressionGenesGeneticGenetic TranscriptionGlutamatesHeroinHeroin AbuseHeroin DependenceHeterogeneityHumanHuman GenomeIndividualInterneuronsKnowledgeLearningLinkLiteratureLysineMapsMemoryMethylationMicrogliaModificationMolecularNPAS4 geneNervous system structureNeurogliaNeuronsNucleic Acid Regulatory SequencesOligodendrogliaOpiate AddictionOutputPharmaceutical PreparationsPopulationPositioning AttributePredispositionPrefrontal CortexRattusRegulator GenesRegulatory ElementResearchRoleSamplingSelf AdministrationSpecificitySynapsesSynaptic plasticityTestingTimeTissuesTransforming Protein ERGUntranslated RNAViralWorkaddictionagedbasebead chipbrain cellcell typeclinical developmentdrug maintenanceeffective therapyefficacious treatmentepigenetic regulationepigenetic variationepigenomeexperiencefrontal lobegamma-Aminobutyric Acidgene repressiongenome resourcegenome-wideheroin abuserhistone modificationhuman imagingimaging studyin vivoinnovationnovelnovel therapeutic interventionopioid abuseopioid overdosepromoterrelating to nervous systemtranscriptometranscriptome sequencing
中文摘要
项目摘要
近年来,阿片类药物滥用和过量用药在美国已经上升到流行的比例。仅限
药物选择目前是可用的,这在很大程度上是因为令人惊讶地缺乏对
阿片成瘾的病理生理机制。最近的动物研究提供了强有力的证据
有证据表明,反复接触毒品会通过表观遗传学改变而导致基因表达的变化
与成瘾相关的行为异常有关的监管。但是,有关
人类成瘾者大脑中的表观遗传图景仍然有限,并且对成瘾者的发展至关重要
临床有效的治疗方法。
最近的研究已经实现了大脑特定表观遗传标记的全面图谱
利用死后组织匀浆提取人类基因组。然而,大脑细胞的异质性排除了
从这些数据中可靠地诠释了特定细胞类型的表观遗传修饰。这个项目的第一个目标是
利用我们新开发的分子策略来阐明神经亚型特定的表观基因组
海洛因成瘾具有前所未有的细节--在四种不同的脑细胞中--这将极大地
提高识别与成瘾相关的表观遗传变异的特定细胞类型特征的可能性。
我们最近对谷氨酸能投射神经元和抑制性GABA的表观遗传学研究
人类眼眶额叶皮质(OFC)的中间神经元提示许多活性依赖基因(ADGs)。
正准备以神经元亚型特有的方式被激活。ADG是由经验驱动的
突触活动(包括接触成瘾药物)和调节神经系统的不同方面,
(包括突触可塑性)。值得注意的是,我们最近在匀浆OFC样本中的rna-seq数据显示
最重大的变化之一是下调了部分助理总干事的规定。这些结果是一致的
随着越来越多的文献暗示前额叶腹侧的输出减少
大脑皮层与药物成瘾。我们假设ADGs的稳态表达和诱导性(
后者是由他们的表观遗传环境决定的)在海洛因成瘾者中改变是神经元亚型特异性的
我们将在目标2中验证这一假设。考虑到ADGs在突触可塑性中的重要性
这伴随着药物成瘾的发展和维持,在目标2中,我们将使用翻译的
建立动物模型,探讨ADGs在海洛因自我给药行为中的细胞特异性功能贡献。
总体而言,这一创新的研究领域将开发独特的数据集,供
并将为全基因组神经亚型特异性研究提供迫切需要的资源
海洛因滥用和正常受试者的染色质和转录组图谱。此外,《金字塔》中的机理研究
动物模型可以促进新的治疗干预措施的发展。
英文摘要
Project Summary
Opiate abuse and overdose have risen to epidemic proportions in the USA in recent years. Only limited
medication options are currently available, which is in large part due to the surprising lack of knowledge about
the pathophysiologic mechanisms that underlie opiate addiction. Recent animal studies have provided robust
evidence that repeated drug exposure induces changes in gene expression through alterations in epigenetic
regulation that are linked to addiction-related behavioral abnormalities. However, information about the
epigenetic landscape in the brains of human addicts remains limited and is critical for the development of
clinically effective treatments.
Recent studies have achieved a comprehensive mapping of brain-specific epigenetic marks in the
human genome using homogenate postmortem tissue. However, cellular heterogeneity of the brain precludes
a reliable annotation of cell-type-specific epigenetic modifications from these data. Aim1 of this project will
leverage our newly developed molecular strategies to illuminate the neural subtype-specific epigenome of
heroin addiction with unprecedented detail—in four different populations of brain cells—which will highly
enhance the likelihood of identifying cell-type-specific signatures of addiction-associated epigenetic variations.
Our recent epigenetic studies in glutamatergic (Glu) projection neurons and inhibitory GABA
interneurons from the human orbital frontal cortex (OFC) suggest that many activity-dependent genes (ADGs)
are “poised” to be activated in a neuron-subtype-specific manner. ADGs are activated by experience-driven
synaptic activity (including exposure to addictive drugs) and regulate diverse aspects of the nervous system,
(including synaptic plasticity). Notably, our recent RNA-seq data in homogenate OFC samples showed that
among the most significant changes is the downregulation of a subset of the ADGs. These results are in line
with the growing body of literature that implicates diminished output from the ventral aspects of the prefrontal
cortex in drug addiction. We hypothesize that the steady-state expression and inducibility of the ADGs (the
latter is determined by their epigenetic milieu) are altered in heroin addicts in a neuron-subtype-specific
manner, and we will test this hypothesis in Aim 2. Considering the importance of ADGs in synaptic plasticity
that accompanies the development and maintenance of drug addiction, in Aim 2 we will utilize a translational
animal model to explore the cell-specific functional contribution of ADGs to heroin self-administration behavior.
Overall, this innovative line of research will develop unique datasets that will be available to the
research community and will provide an urgently needed resource for genome-wide neural subtype-specific
chromatin and transcriptome maps in heroin abuse and normal subjects. Moreover, the mechanistic studies in
animal models can promote the development of novel therapeutic interventions.
期刊论文(3)
专著(0)
科研奖励(0)
会议论文
DOI:
10.1073/pnas.2011884117
发表时间:
2020-11-10
期刊:
Proceedings of the National Academy of Sciences of the United States of America
影响因子:
11.1
作者:
[Kozlenkov A, Vermunt MW, Apontes P, Li J, Hao K, Sherwood CC, Hof PR, Ely JJ, Wegner M, Mukamel EA, Creyghton MP, Koonin EV, Dracheva S]
通讯作者:
Dracheva S
DOI:
10.1038/s41467-020-19319-2
发表时间:
2020-11-04
期刊:
Nature communications
影响因子:
16.6
作者:
[Hauberg ME, Creus-Muncunill J, Bendl J, Kozlenkov A, Zeng B, Corwin C, Chowdhury S, Kranz H, Hurd YL, Wegner M, Børglum AD, Dracheva S, Ehrlich ME, Fullard JF, Roussos P]
通讯作者:
Roussos P
Cell-type-specific molecular pathology of ALS in U.S. military Veterans
-
批准号:10254543
-
项目类别:
-
资助金额:$0.0万
-
财政年份:2021
-
负责人:STELLA DRACHEVA
-
依托单位:
Cell-type-specific molecular pathology of ALS in U.S. military Veterans
-
批准号:10513300
-
项目类别:
-
资助金额:$0.0万
-
财政年份:2021
-
负责人:STELLA DRACHEVA
-
依托单位:
The role of microglia in major depressive disorder
-
批准号:10248619
-
项目类别:
-
资助金额:$0.0万
-
财政年份:2021
-
负责人:STELLA DRACHEVA
-
依托单位:
The role of microglia in major depressive disorder
-
批准号:10513304
-
项目类别:
-
资助金额:$0.0万
-
财政年份:2021
-
负责人:STELLA DRACHEVA
-
依托单位:
2/3 High-resolution mapping of cell type-specific DNA (hydroxy)methylation in the human brain during postnatal development and in psychiatric disease
-
批准号:10360613
-
项目类别:
-
资助金额:$52.7万
-
财政年份:2020
-
负责人:STELLA DRACHEVA
-
依托单位:
2/3 High-resolution mapping of cell type-specific DNA (hydroxy)methylation in the human brain during postnatal development and in psychiatric disease
-
批准号:10588161
-
项目类别:
-
资助金额:$40.81万
-
财政年份:2020
-
负责人:STELLA DRACHEVA
-
依托单位:
Cell Specificity of the Human Heroin Epigenome
-
批准号:9323122
-
项目类别:
-
资助金额:$54.05万
-
财政年份:2017
-
负责人:STELLA DRACHEVA
-
依托单位:
The role of ADAR2-associated RNA editing in pathogenesis of ALS
-
批准号:10084222
-
项目类别:
-
资助金额:$0.0万
-
财政年份:2017
-
负责人:STELLA DRACHEVA
-
依托单位:
Genetic and Molecular Determinants of Suicide
-
批准号:8774539
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项目类别:
-
资助金额:$0.0万
-
财政年份:2014
-
负责人:STELLA DRACHEVA
-
依托单位:
Genetic and Molecular Determinants of Suicide
-
批准号:8974291
-
项目类别:
-
资助金额:$0.0万
-
财政年份:2014
-
负责人:STELLA DRACHEVA
-
依托单位:
RNA Editing Alterations in Spinal Cord Injury
-
批准号:8974362
-
项目类别:
-
资助金额:$0.0万
-
财政年份:2014
-
负责人:STELLA DRACHEVA
-
依托单位:
RNA Editing Alterations in Spinal Cord Injury
-
批准号:8825893
-
项目类别:
-
资助金额:$0.0万
-
财政年份:2014
-
负责人:STELLA DRACHEVA
-
依托单位:
Genetic and Molecular Determinants of Suicide
-
批准号:8541171
-
项目类别:
-
资助金额:$0.0万
-
财政年份:2014
-
负责人:STELLA DRACHEVA
-
依托单位:
RNA Editing Alterations in Spinal Cord Injury
-
批准号:8634265
-
项目类别:
-
资助金额:$0.0万
-
财政年份:2014
-
负责人:STELLA DRACHEVA
-
依托单位:
Molecular Determinants of Individual Differences in Fear Reactivity and Recovery
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批准号:8443755
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项目类别:
-
资助金额:$21.68万
-
财政年份:2012
-
负责人:STELLA DRACHEVA
-
依托单位:
Molecular Determinants of Individual Differences in Fear Reactivity and Recovery
-
批准号:8538508
-
项目类别:
-
资助金额:$17.2万
-
财政年份:2012
-
负责人:STELLA DRACHEVA
-
依托单位:
Probing the Link between RNA Editing and Drug Addiction
-
批准号:8132183
-
项目类别:
-
资助金额:$17.6万
-
财政年份:2011
-
负责人:STELLA DRACHEVA
-
依托单位:
Probing the Link between RNA Editing and Drug Addiction
-
批准号:8232096
-
项目类别:
-
资助金额:$17.6万
-
财政年份:2011
-
负责人:STELLA DRACHEVA
-
依托单位:
RNA editing in suicide, major depression and animal model of depression
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批准号:7870161
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项目类别:
-
资助金额:$20.78万
-
财政年份:2010
-
负责人:STELLA DRACHEVA
-
依托单位:
RNA editing in suicide, major depression and animal model of depression
-
批准号:8046445
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项目类别:
-
资助金额:$17.13万
-
财政年份:2010
-
负责人:STELLA DRACHEVA
-
依托单位:
海外基金