Integrin alpha6beta4 regulation of cancer epigenetics

DNA去甲基化机制如何能够针对特定的基因组位点仍然知之甚少。 对肿瘤生物学有重要意义。越来越多的证据表明，微环境 影响表观遗传学；然而，指导这些事件的机制尚未阐明。我们有 证明了整合素α6β4显著改变了转录组的侵袭性表型。这个 整合素在一定程度上通过调节dna来改变表观基因组，从而调节这一过程。 精选CpG富集区和基因座去甲基化。因此，我们希望了解整合素α6β4是如何 调控癌症表观基因组是定位和机械转导表观遗传学的关键 受监管的。关于整合素α6β4如何调节dna去甲基化的研究(由NCI R21资助)导致 我们的发现整合素α6β4利用并刺激碱基切除修复途径介导 这些表观遗传事件，但不是在细胞中，其中整合素α6β4和细胞核之间的联系是 妥协了。我们还鉴定了整合素β4亚单位的特定突变，这种突变可以阻止整合素 与中间丝结合并锚定在细胞核下，从而表明整合素- 介导了核功能的改变。根据我们的初步数据和辅助文献，我们 假设整合素α6β4协调信号和机械转导到驱动误码率的细胞核 并导致选定基因座的DNA去甲基化，这反过来又增强了肿瘤的侵袭和转移。我们会 通过完成以下三个目标来测试我们的中心假设：1)确定整合素α6β4如何 细胞骨架联系影响侵袭、转移和表观遗传学，2)阐明整合素α6β4如何调节 BER介导的脱甲基化，以及3)定义整合素α6β4介导的表观基因组的变化 发信号。我们期望通过阐明整合素α6β4所使用的基因和途径来调节 对于特定基因的去甲基化，我们将提供对基因组中特定位置如何的关键洞察 去甲基化以培育侵袭性和转移性转录组。

How DNA demethylation machinery can be targeted to specific genomic loci is still poorly understood, yet has important implications for tumor biology. Mounting evidence suggests that the microenvironment influences epigenetics; however, the mechanisms guiding these events have not been elucidated. We have demonstrated that integrin α6β4 dramatically alters the transcriptome toward an invasive phenotype. The integrin regulates this process, in part, by substantially changing the epigenome through the regulation of DNA demethylation of select CpG rich regions and loci. Thus, we expect that understanding how integrin α6β4 regulates the cancer epigenome holds the key to how site-specific and mechanotransduced epigenetics are regulated. Investigations into how integrin α6β4 regulates DNA demethylation (funded by an NCI R21) led to our discovery that integrin α6β4 utilizes and stimulates the base excision repair (BER) pathway to mediate these epigenetic events, but not in cells in which the link between integrin α6β4 and the nucleus is compromised. We have also identified specific mutations in integrin β4 subunit that preventing the integrin from binding to intermediate filaments and anchoring under the nucleus, thus indicating a pathway for integrin- mediated alterations in nuclear function. Based on our preliminary data and supporting literature, we hypothesize that integrin α6β4 coordinates signal and mechano-transduction to the nucleus that drives BER and results in DNA demethylation of select loci, which in turn enhances tumor invasion and metastasis. We will test our central hypothesis through completion of the following three aims: 1) Determine how integrin α6β4 cytoskeletal linkages impacts invasion, metastasis and epigenetics, 2) Elucidate how integrin α6β4 regulates BER-mediated DNA demethylation, and 3) Define changes in the epigenome mediated by integrin α6β4 signaling. We expect that by elucidating the genes and pathways used by integrin α6β4 to modulate the demethylation of select genes, we will provide critical insight into how specific sites within the genome are demethylated to foster an invasive and metastatic transcriptome.