Identifying common and tissue-specific genetic drivers of fundamental biological processes taking place in human mitochondria
Identifying common and tissue-specific genetic drivers of fundamental biological processes taking place in human mitochondria
批准号:
BB/R006075/1
负责人:
Alan Hodgkinson
金额:
$41.59万
依托单位:
依托单位国家:
英国
项目类别:
Research Grant
财政年份:
2018
资助国家:
英国
项目状态:
已结题
起止时间:
2018 至 --
中文摘要
线粒体是“细胞器”(可以被认为类似于人体的器官),它在细胞中发挥特定的作用,帮助细胞正常运作。线粒体主要负责产生用于肌肉运动、呼吸和心脏功能等基本过程的化学“能量”,但它们也参与大脑信号传递和产生体热等过程。由于线粒体在这些重要过程中的核心作用,功能不良的线粒体与帕金森病、糖尿病和癌症等多种疾病有关,而大脑等高能量组织往往受到的影响最大。因此,了解线粒体在各个组织中发生的生物过程对人类健康至关重要。除了存在于细胞核中的遗传物质(DNA),线粒体也有自己的DNA,细胞核提供了生命的蓝图。这种遗传密码为线粒体产生细胞能量所需的蛋白质提供了信息。在这些蛋白质被利用之前,线粒体DNA被转化为RNA(基因的表达),然后以不同的方式加工,然后被翻译成蛋白质。将线粒体DNA转化为蛋白质的步骤是复杂的,多阶段的,并且在任何时候都依赖于核基因组中编码的基因。因此,核基因组和线粒体基因组之间有很强的关系:已知核基因组的突变会导致线粒体疾病。虽然我们对参与线粒体过程的核基因了解很多,但仍然缺乏对影响线粒体功能的分子过程的所有阶段的了解,并且我们缺乏健康个体携带的可以影响线粒体基因表达水平和线粒体RNA加工的常见基因突变的目录。在这项研究中,我们将使用新技术来量化线粒体基因在大量个体和许多不同组织类型中的表达水平,从而为所有未来对比较健康和患病个体线粒体RNA水平感兴趣的研究创建一个参考框架。利用这些数据,我们将确定核基因组中与线粒体基因表达变异相关的遗传变异,并测试这种遗传变异是否仅在某些组织中重要,还是在整个人体中起作用。在此之后,我们将把我们确定的与线粒体基因表达相关的遗传变异与人类基因组的特征和注释数据库以及与疾病相关的突变目录进行比较。通过这种方式,我们将试图了解线粒体基因表达受到调节的机制,以及这些过程是否有助于研究人员了解疾病的潜在原因。在健康个体中研究这些过程将使我们能够识别对线粒体正常功能重要的基因,但也将创建一个目标基因(和突变)列表,这些基因可能在某些个体中变得功能失调,因此对疾病的研究很重要。由于线粒体在心脏和大脑等高能量组织中更为重要,因此了解这些过程在不同组织中是否不同将是推断对人类健康潜在影响的关键。最后,这里发现的基因和基因突变可以确定在衰老过程中重要的生物过程,因为功能不良的线粒体是衰老过程的一个标志,并且还可以突出与线粒体功能相关的核基因,这对于在三亲胚胎的背景下研究很重要。
英文摘要
Mitochondria are 'organelles' (which can be thought of as analogous to the organs of the human body) that perform specific roles in the cell to help it to function normally. Primarily mitochondria are responsible for generating chemical 'energy' that is used for fundamental processes like muscle movement, respiration and heart function, but they are also involved in processes like signal transmission in the brain and generating body heat. Due to their central role in these important processes, poor functioning mitochondria have been implicated in a wide range of diseases such as Parkinson's disease, diabetes and cancer, with high-energy tissues such as the brain often being the most affected. As a consequence, understanding the biological processes taking place in the mitochondria across tissues is key to human health.Alongside genetic material (DNA) that is present in the nucleus, which provides the blueprint for life, mitochondria also have their own DNA. This genetic code provides information to create proteins that are required for mitochondria to generate cellular energy. Before these proteins can be utilized, mitochondrial DNA is converted to RNA (expression of the gene), which is then processed in different ways before being translated into proteins. The steps converting mitochondrial DNA into proteins are complex, multi-staged and at all points rely on genes that are coded in the nuclear genome. As a result, there are strong relationships between the nuclear and mitochondrial genomes: mutations in the nuclear genome are known to cause mitochondrial disorders. Although we understand a great deal about the nuclear genes involved in mitochondrial processes, there is still a lack of understanding of all stages of the molecular processes influencing mitochondrial function, and we are lacking a catalogue of common genetic mutations carried by healthy individuals that can influence the levels of expression of mitochondrial genes and the processing of mitochondrial RNA. In this study we will use novel techniques to quantify the expression levels of mitochondrial genes across a large number of individuals and in many different tissue types, therefore creating a frame of reference for all future studies interested in comparing mitochondrial RNA levels in healthy and diseased individuals. Using this data we will then identify genetic variation in the nuclear genome that is associated with variation in mitochondrial gene expression and test whether this genetic variation is only important in certain tissues, or whether it acts across the entire human body. Following this, we will compare the genetic variation we identify as being associated with mitochondrial gene expression to databases of the features and annotations of the human genome, as well as catalogues of mutations linked to disease. In this way, we will attempt to understand the mechanisms by which mitochondrial gene expression is regulated and whether these processes may help researchers to understand the underlying causes of disease.Studying these processes in healthy individuals will allow us to identify genes that are important in the normal functioning of mitochondria, but will also create a list of target genes (and mutations) that may become dysfunctional in some individuals and are therefore important for the study of diseases. Since mitochondria tend to be more important in high-energy tissues such as the heart and brain, understanding if these processes vary in different tissues will be key to inferring the potential impacts on human health. Finally, genes and genetic mutations identified here may identify biological processes that are important in ageing, since poor functioning mitochondria are one hallmark of the ageing process, and could also highlight nuclear genes associated with mitochondrial function that are important to study in the context of three-parent embryos.
期刊论文(5)
专著(0)
科研奖励(0)
会议论文
Additional file 1 of Identification of human mitochondrial RNA cleavage sites and candidate RNA processing factors
人类线粒体RNA切割位点和候选RNA加工因子的鉴定附加文件1
DOI:
10.6084/m9.figshare.20364810
发表时间:
2022
期刊:
影响因子:
--
作者:
[Carbajosa G]
通讯作者:
Carbajosa G
DOI:
10.1186/s12915-022-01373-5
发表时间:
2022-07-22
期刊:
BMC BIOLOGY
影响因子:
5.4
作者:
[Carbajosa, Guillermo, Ali, Aminah T., Hodgkinson, Alan]
通讯作者:
Hodgkinson, Alan
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