COLLABORATIVE STUDY OF THE GENETICS OF ASTHMA (CSGA)
COLLABORATIVE STUDY OF THE GENETICS OF ASTHMA (CSGA)
批准号:
6389259
负责人:
Carole Ober
金额:
$82.86万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
1992
资助国家:
美国
项目状态:
已结题
起止时间:
1992-09-30 至 2003-08-31
关键词:
asthma clinical research cooperative study disease /disorder proneness /risk family genetics gene environment interaction genetic markers genetic models genetic polymorphism genotype human population genetics human subject immunologic skin test linkage mapping medical records racial /ethnic difference respiratory disorder diagnosis
中文摘要
流行病学数据表明,哮喘的一个主要危险因素是
有积极的家族史。然而,导致癌症易感性的基因
哮喘是未知的。我们建议通过以下方法确定哮喘易感基因
利用微卫星进行两点复合连锁分析
标记分布在定义明确的家系的整个基因组中
哮喘。我们的研究将集中在两个不同的样本上:芝加哥市中心
和郊区家庭通过儿童和成人哮喘确诊
芝加哥大学的诊所和哈特利派成员
兄弟会,一种生活在南方公共农场的宗教孤立
达科他州。后一种人群以前的特征是
对哮喘和其他呼吸道疾病的尊重。我们建议研究
150个诊所家庭(平均家庭人数=10人)和8个
代代相传的哈特利家族。将通过以下方式选择族
至少有一个一级亲属的哮喘先证者
哮喘。在受影响和未受影响的受试者中诊断哮喘将
使用基于病史和结果的严格标准进行
肺活量测定法和乙酰甲胆碱挑战研究。常见的皮肤测试
将进行吸入抗原、IgE水平和嗜酸性粒细胞计数
将在所有科目上进行测量。所有家庭成员都将是基因型
多达300个多态DNA标记(微卫星标记)
接近“候选易感基因座”或随机分布
在整个基因组中。将建立永久线路或单元格
源自所有科目。对遗传数据的初步筛选将是
使用两点连锁分析,考虑两个基因
包含疾病流行率为10并假定异质性的模型
但在外显率和比例贡献方面有所不同
易感基因座(20%vs.40%)。LOD得分高出两分
在任何遗传模型下都将受到进一步的
使用非参数检验、多点关联分析和
更复杂的遗传模型,融合了额外的遗传和
环境协变量。如果发现与易感基因连锁,
将尝试识别和克隆易感基因。
一旦知道易感等位基因,预防措施就可以集中在
有患哮喘风险的个人。辨证哮喘
易感等位基因也有助于阐明
原发缺陷与哮喘的发展改良
治疗。
英文摘要
Epidemiologic data indicate that a major risk factor for asthma is a
positive family history. However, genes that confer susceptibility to
asthma are unknown. We propose to identify asthma susceptibility loci by
performing two-point and complex linkage analysis with microsatellite
markers distributed throughout the genome in families with well-defined
asthma. Our study will focus on two distinct samples: Chicago inner-city
and suburban families ascertained through the pediatric and adult asthma
clinics at the University of Chicago and members of the Hutterite
brethren, a religious isolate that lives on communal farms in South
Dakota. The latter population has previously been characterized with
respect to asthma and other respiratory illnesses. We propose to study
150 clinic families (average family size = 10) and eight
multigenerational Hutterite families. Families will be selected through
asthmatic probands who have at least one first degree relative with
asthma. The diagnosis of asthma in affected and unaffected subjects will
be made using strict criteria based on medical history and results of
spirometry and methacholine challenge studies. Skin tests for commonly
inhaled antigens will be performed, and IgE levels and eosinophil counts
will be measured on all subjects. All family members will be genotype
for up to 300 polymorphic DNA markers (microsatellite markers) that map
near "candidate susceptibility loci" or are distributed randomly
throughout the genome. Permanent lines will be established or cells
derived from all subjects. Preliminary screening of genetic data will be
performed using two-point linkage analysis, considering two genetic
models that include a disease prevalence of 10 and assume heterogeneity
but vary with respect to penetrance and the proportional contribution of
the susceptibility locus (20% vs. 40%). A two-point lod score greater
than 2.0 under any genetic model will be subjected to further
investigation using nonparametric tests, multipoint linkage analysis, and
more sophisticated genetic models that incorporate additional genetic and
environmental covariates. If linkage to a susceptibility locus is found,
attempts will be make to identify and clone the susceptibility locus.
Once susceptibility alleles are known, preventive measures can focus on
individuals at-risk for developing asthma. Identifying asthma
susceptibility alleles would also contribute toward elucidating the
primary defect in asthma and advance the development of improved
treatments.
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Optimal sequencing strategies for surveying molecular genetic diversity.
用于调查分子遗传多样性的最佳测序策略。
DOI:
10.1093/genetics/144.3.1247
发表时间:
1996
期刊:
Genetics
影响因子:
3.3
作者:
[Pluzhnikov,A, Donnelly,P]
通讯作者:
Donnelly,P
Genome-wide approaches for identifying interacting susceptibility regions for asthma.
用于识别哮喘相互作用易感区域的全基因组方法。
DOI:
10.1002/gepi.2001.21.s1.s266
发表时间:
2001
期刊:
Genetic epidemiology.
影响因子:
--
作者:
[Colilla,S, Tsalenko,A, Pluznikov,A, Cox,NJ]
通讯作者:
Cox,NJ
Susceptibility genes in asthma and allergy.
哮喘和过敏的易感基因。
DOI:
10.1007/s11882-001-0085-4
发表时间:
2001
期刊:
Current allergy and asthma reports
影响因子:
5.5
作者:
[Ober,C]
通讯作者:
Ober,C
Sequence variation in the promoter region of the cholinergic receptor muscarinic 3 gene and asthma and atopy.
胆碱能受体毒蕈碱 3 基因启动子区域的序列变异与哮喘和特应性。
DOI:
10.1067/mai.2003.71
发表时间:
2003
期刊:
The Journal of allergy and clinical immunology
影响因子:
--
作者:
[Donfack,Joseph, Kogut,Paul, Forsythe,Sean, Solway,Julian, Ober,Carole]
通讯作者:
Ober,Carole
A population genetics study of single nucleotide polymorphisms in the interleukin 4 receptor alpha (IL4RA) gene.
白介素 4 受体 α (IL4RA) 基因单核苷酸多态性的群体遗传学研究。
DOI:
10.1038/sj.gene.6363746
发表时间:
2001
期刊:
Genes and immunity.
影响因子:
--
作者:
[Wu,X, DiRienzo,A, Ober,C]
通讯作者:
Ober,C
共 11 条
Gene Discovery in Asthma and Allergic Diseases
-
批准号:10453776
-
项目类别:
-
资助金额:$45.73万
-
财政年份:2021
-
负责人:Carole Ober
-
依托单位:
Admin Core
-
批准号:10453774
-
项目类别:
-
资助金额:$4.23万
-
财政年份:2021
-
负责人:Carole Ober
-
依托单位:
Admin Core
-
批准号:10827532
-
项目类别:
-
资助金额:$6.07万
-
财政年份:2021
-
负责人:Carole Ober
-
依托单位:
Gene Discovery in Asthma and Allergic Diseases
-
批准号:10261990
-
项目类别:
-
资助金额:$33.44万
-
财政年份:2021
-
负责人:Carole Ober
-
依托单位:
Gene Discovery in Asthma and Allergic Diseases
-
批准号:10827534
-
项目类别:
-
资助金额:$38.7万
-
财政年份:2021
-
负责人:Carole Ober
-
依托单位:
Admin Core
-
批准号:10261988
-
项目类别:
-
资助金额:$5.53万
-
财政年份:2021
-
负责人:Carole Ober
-
依托单位:
Maternal asthma and epigenomic modification in offspring with asthma
-
批准号:9312388
-
项目类别:
-
资助金额:$5.25万
-
财政年份:2016
-
负责人:Carole Ober
-
依托单位:
Mendelian Disease - Asthma Comorbidity to Find Subgroup-Specific Asthma Genes
-
批准号:8875986
-
项目类别:
-
资助金额:$80.28万
-
财政年份:2015
-
负责人:Carole Ober
-
依托单位:
Mendelian Disease - Asthma Comorbidity to Find Subgroup-Specific Asthma Genes
-
批准号:9300966
-
项目类别:
-
资助金额:$76.9万
-
财政年份:2015
-
负责人:Carole Ober
-
依托单位:
Mendelian Disease - Asthma Comorbidity to Find Subgroup-Specific Asthma Genes
-
批准号:9130935
-
项目类别:
-
资助金额:$77.9万
-
财政年份:2015
-
负责人:Carole Ober
-
依托单位:
Maternal asthma and epigenomic modification in offspring with asthma
-
批准号:8380126
-
项目类别:
-
资助金额:$37.17万
-
财政年份:2012
-
负责人:Carole Ober
-
依托单位:
Airway inflammation and HLA-G in asthma
-
批准号:8164348
-
项目类别:
-
资助金额:$202.49万
-
财政年份:2011
-
负责人:Carole Ober
-
依托单位:
Airway inflammation and HLA-G in asthma
-
批准号:8503584
-
项目类别:
-
资助金额:$210.7万
-
财政年份:2011
-
负责人:Carole Ober
-
依托单位:
Maternal asthma and epigenomic modification in offspring with asthma
-
批准号:8196613
-
项目类别:
-
资助金额:$35.78万
-
财政年份:2011
-
负责人:Carole Ober
-
依托单位:
Airway inflammation and HLA-G in asthma
-
批准号:8691367
-
项目类别:
-
资助金额:$220.93万
-
财政年份:2011
-
负责人:Carole Ober
-
依托单位:
Airway inflammation and HLA-G in asthma
-
批准号:8691009
-
项目类别:
-
资助金额:$6.67万
-
财政年份:2011
-
负责人:Carole Ober
-
依托单位:
Airway inflammation and HLA-G in asthma
-
批准号:8305461
-
项目类别:
-
资助金额:$208.41万
-
财政年份:2011
-
负责人:Carole Ober
-
依托单位:
Airway inflammation and HLA-G in asthma
-
批准号:8881072
-
项目类别:
-
资助金额:$185.11万
-
财政年份:2011
-
负责人:Carole Ober
-
依托单位:
Airway inflammation and HLA-G in asthma
-
批准号:9312384
-
项目类别:
-
资助金额:$15.0万
-
财政年份:2011
-
负责人:Carole Ober
-
依托单位:
Gene-Enviroment Interactions and the Origins of Asthma
-
批准号:8071525
-
项目类别:
-
资助金额:$42.53万
-
财政年份:2010
-
负责人:Carole Ober
-
依托单位:
海外基金