A STUDY OF TRANSVECTION AT THE DROSOPHILA YELLOW GENE
A STUDY OF TRANSVECTION AT THE DROSOPHILA YELLOW GENE
批准号:
6636514
负责人:
CHAO-TING WU
金额:
$44.65万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2000
资助国家:
美国
项目状态:
已结题
起止时间:
2000-07-01 至 2005-06-30
中文摘要
这项拟议的研究通过聚焦于反式作用,探索了果蝇染色质结构水平上的基因调控。反式作用是一种不寻常的基因调节形式,反映了基因与其同源物的接近程度。它解决了黄色基因的转基因问题。在这里,转基因是基因内互补的基础。特别是,研究表明,当某些等位基因配对时,其中一个的增强子可以反式作用于另一个的启动子。数据还表明,释放增强子发挥反式作用的先决条件可能是其自身的启动子被禁用。对这一模型的初步研究已经有了相当大的扩展。此外,他们提出了第二种转基因模式,在这种模式下,不同的等位基因配对导致基因拓扑,允许增强子绕过染色质绝缘体。这项拟议的研究测试并推广了这些令人惊讶的、对黄色凌日的新解释。特异性目标1测试了反式增强子的作用由启动子的转录能力控制的模型。特定目标2测试了配对可以决定基因拓扑以允许增强子绕过绝缘体的提议。在具体目标3中,这些研究超越了黄色,并询问基因和基因组是否通常对传播具有渗透性。最后,特定目标4寻找调节和控制转运的反式作用因素。我们的研究使用了两种技术来满足同源配对的横向需求。这些是有针对性的基因转化(特定目标1、2和3)和一种允许将基因放置到不同染色体上的等位基因位置的技术(特定目标3)。具体目标4使用标准的遗传和分子生物学方法。有强有力的证据表明,同源配对是一种强大的力量,可以在许多生物体中造成严重后果。它可能会导致一些医学疾病,并限制某些农业技术。因此,这里的研究可能会通过对医学和农业的贡献来造福人类。
英文摘要
The proposed research explores gene regulation at the level of chromatin structure in Drosophila by focusing on transvection, an unusual form of gene modulation that reflects the proximity of a gene to its homologue. It addresses transvection at the yellow gene. Here, transvection is the basis for intragenic complementation. In particular, studies indicate that when certain alleles are paired, the enhancers of one can act in trans on the promoter of the other. The data also suggest that a prerequisite for the release of an enhancer to act in trans may be the disabling of its own promoter. The preliminary studies have expanded considerably upon this model. In addition, they suggest a second mode of transvection in which the pairing of dissimilar alleles leads to gene topologies that allow an enhancer to bypass a chromatin insulator. The proposed research tests and extends these surprising and new interpretations of transvection at yellow. Specific Aim 1 tests the model in which enhancer action in trans is controlled by the transcriptional competence of the promoter. Specific Aim 2 tests the proposal that pairing can dictate gene topologies to allow an enhancer to bypass an insulator. In Specific Aim 3, the studies extend beyond yellow and ask whether genes and the genome are generally permissiveness for transvection. Finally, Specific Aim 4 searches for the trans- acting factors that mediate and control transvection. Our studies use two technologies to meet the requirement of transvection for homologue pairing. These are targeted gene conversion (Specific Aims 1, 2, and 3) and a technique that allows the placement of genes into allelic positions on different chromosomes (Specific Aim 3). Specific Aim 4 uses standard genetic and molecular biological approaches. There is strong evidence that homologue pairing is a potent force that can cause severe consequences in many organisms. It may underlie some medical diseases and limit certain agricultural technologies. Therefore, the studies here are likely to benefit human welfare through contributions to both medicine and agriculture.
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Scalable amplification of strand subsets from chip-synthesized oligonucleotide libraries.
从芯片合成的寡核苷酸文库中可扩展地扩增链子集。
DOI:
10.1038/ncomms9634
发表时间:
2015-11-16
期刊:
Nature communications
影响因子:
16.6
作者:
[Schmidt TL, Beliveau BJ, Uca YO, Theilmann M, Da Cruz F, Wu CT, Shih WM]
通讯作者:
Shih WM
DOI:
10.1371/journal.pgen.1002667
发表时间:
2012
期刊:
PLoS genetics
影响因子:
4.5
作者:
[Joyce EF, Williams BR, Xie T, Wu CT]
通讯作者:
Wu CT
DOI:
10.1371/journal.pgen.1004646
发表时间:
2014-10
期刊:
PLoS genetics
影响因子:
4.5
作者:
[McCole RB, Fonseka CY, Koren A, Wu CT]
通讯作者:
Wu CT
Does random X-inactivation in mammals reflect a random choice between two X chromosomes?
哺乳动物中随机 X 失活是否反映了两条 X 染色体之间的随机选择?
DOI:
10.1534/genetics.104.029819
发表时间:
2004
期刊:
Genetics.
影响因子:
--
作者:
[Williams,BenjaminR, Wu,Chao-Ting]
通讯作者:
Wu,Chao-Ting
Single-molecule super-resolution imaging of chromosomes and in situ haplotype visualization using Oligopaint FISH probes.
使用寡头鱼类探针的染色体和原位单倍型可视化的单分子超分辨率成像。
DOI:
10.1038/ncomms8147
发表时间:
2015-05-12
期刊:
NATURE COMMUNICATIONS
影响因子:
16.6
作者:
[Beliveau, Brian J., Boettiger, Alistair N., Avendano, Maier S., Jungmann, Ralf, McCole, Ruth B., Joyce, Eric F., Kim-Kiselak, Caroline, Bantignies, Frederic, Fonseka, Chamith Y., Erceg, Jelena, Hannan, Mohammed A., Hoang, Hien G., Colognori, David, Lee, Jeannie T., Shih, William M., Yin, Peng, Zhuang, Xiaowei, Wu, Chao-ting]
通讯作者:
Wu, Chao-ting
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