Imaging of gene expression in glioblastoma

描述（由申请人提供）：正常脑和其胶质源性肿瘤之间基因表达模式的差异可以为恶性胶质瘤的诊断和治疗提供有用的信息。这些肿瘤在MRI扫描上可见之前无法诊断，目前无法治疗（患者的平均生存期= 6-12个月）。神经胶质瘤肿瘤形成和恶性进展的标记物通过基因分析方法变得可用，例如基因表达系列分析（SAGE）。最近，恶性胶质瘤（GBM）的SAGE数据已经通过癌症基因组解剖计划（CGAP）的努力变得可用，并且已经鉴定出在GBM中过表达而不在正常脑中过表达的几个基因。这些信息可以用来设计用于这些肿瘤的成像和治疗的选择性标记物。具体而言，该项目提出：1-验证候选SAGE鉴定的GBM基因在GBM中确实过表达，2-从转录过活性基因中分离相关启动子片段，以及3-测试克隆的转录过活性启动子在体外和体内模型中提供GBM特异性cDNA表达用于成像和治疗的能力。both.in将在GBM肿瘤细胞中验证GBM特异性基因的SAGE数据，并使用激光捕获显微切割和定量RT-PCR分析与正常细胞进行比较。将研究真正过表达的基因，并排除可能导致过表达的转录以外的事件。候选基因的启动子序列将通过含有候选基因的基因组序列的适当细菌人工染色体（BAG）分离。将这些BAC转化为感染性载体的新方法将用于研究和确认GBM细胞中启动子的功能性和选择性。然后，GBM过度活性和选择性启动子将用于指导胶质瘤细胞中成像cDNA和/或“自杀”基因的转录，首先在组织培养物中，然后在体内癌症模型中。这些研究将为CGAP数据转化为有用的诊断和治疗模式提供一条途径，不仅适用于脑恶性肿瘤，也适用于其他肿瘤。本文提出的概念方案也可能适用于基因谱分析可用的各种疾病。

DESCRIPTION (provided by applicant): Differences in the pattern of gene expression between normal brain and its tumors of glial origin can provide information useful for malignant glioma diagnosis and therapy. These tumors cannot be diagnosed until they become visible on MRI scans and cannot be currently treated (mean survival of patients = 6-12 months). Markers for glioma tumor formation and malignant progression are becoming available through gene profiling methods, such as serial analysis of gene expression (SAGE). Recently, SAGE data for malignant glioma (GBM) has become available through efforts of the Cancer Genome Anatomy Project (CGAP) and several genes have been identified that are over-expressed in GBM and not in normal brain. This information can be exploited to design selective markers for imaging and treatment of these tumors. Specifically, this project proposes to: 1- Verify that candidate SAGE-identified GBM genes are truly overexpressed in GBMs, 2- Isolate the relevant promoter fragments from transcriptionally overactive genes, and 3-Test the ability of cloned transcriptionally over-active promoters to provide GBM-specific cDNA expression for imaging and therapy in both.in vitro and in vivo models. SAGE data on GBM-specific genes will be verified in GBM tumor cells and compared to normal cells using laser-capture microdissection and quantitative RT-PCR analyses. Truly overexpressed genes will be investigated and events other than transcription that may be causing overexpression will be ruled out. Promoter sequences of candidate genes will be isolated through the appropriate bacterial artificial chromosome (BAG) containing the genomic sequence of the candidate genes. A novel method of converting these BACs into infectious vectors will be used to study and confirm promoter functionality and selectivity in GBM cells. GBM overactive and selective promoters will then used to direct transcription of an imaging cDNA and/or of a "suicide" gene in glioma cells, first in tissue culture and then in in vivo models of cancer. These studies will provide an avenue for translating CGAP data into useful diagnostic and therapeutic modalities not only for malignant tumors in the brain, but also for other tumors. The conceptual scheme presented herein is also potentially applicable to a variety of diseases for which gene profiling analyses is available.