DEVELOPMENT OF TECHNOLOGIES FOR RESOLUTION AND STRUCTURAL DELINEATION OF INTACT
DEVELOPMENT OF TECHNOLOGIES FOR RESOLUTION AND STRUCTURAL DELINEATION OF INTACT
批准号:
7724181
负责人:
CHARLES DAVID ALLIS
金额:
$1.16万
依托单位国家:
美国
项目类别:
财政年份:
2008
资助国家:
美国
项目状态:
已结题
起止时间:
2008-06-01 至 2009-05-31
关键词:
AcetylationAmino AcidsCell physiologyChromatinCodeComputer Retrieval of Information on Scientific Projects DatabaseDevelopmentDigestionDissociationElectronsEquilibriumFundingGrantHistonesIndividualInstitutionLanguageMethylationModificationMolecular WeightPatternPhosphorylationPost-Translational Protein ProcessingProtein IsoformsProteinsReadingResearchResearch PersonnelResolutionResourcesSiteSourceThinkingUnited States National Institutes of HealthVariantbaseprotein aminoacid sequencestoichiometrytechnology development
中文摘要
这个子项目是许多研究子项目中利用
资源由NIH/NCRR资助的中心拨款提供。子项目和
调查员(PI)可能从NIH的另一个来源获得了主要资金,
并因此可以在其他清晰的条目中表示。列出的机构是
该中心不一定是调查人员的机构。
组蛋白翻译后修饰包括可逆乙酰化和磷酸化、甲基化、泛素化和核糖化,这些修饰在多个位点具有不同的化学计量比。人们认为,特定氨基酸残基的某些修饰模式编码了一种语言,参与管理染色质许多功能的蛋白质可以阅读这种语言。要破译这样的编码,需要完整描述每个异构体和变体的所有翻译后修饰,以及它们作为细胞状态函数的时间变化。这一挑战需要发展质量平衡,以便明确地描述每种特定异构体的翻译后状态。可以设想,这两种FTM与解离策略一起是必不可少的,例如电子俘获解离或可能的IR激活以及独立。消化和多肽序列,以填补模板中的任何空白,可从完整的蛋白质解离获得。还可以设想,均相完整异构体的分离将必须通过基于从混合物中准确选择单个分子量的质谱学策略来分离。
英文摘要
This subproject is one of many research subprojects utilizing the
resources provided by a Center grant funded by NIH/NCRR. The subproject and
investigator (PI) may have received primary funding from another NIH source,
and thus could be represented in other CRISP entries. The institution listed is
for the Center, which is not necessarily the institution for the investigator.
Histone posttranslational modifications include reversible acetylation and phosphorylation, methylation, ubiquitinylation and ribosylation with varying stoichiometry at multiple sites. It is thought that certain patterns of modifications at specific amino acid residues encode a language that is read by proteins involved in management of chromatin's many functions. To decipher such a code will require the complete delineation of all posttranslational modifications of each isoform and variant as well as their temporal changes as a function of cell state. This challenge requires development of mass balance for unambiguous delineation of posttranslational status for each particular isoform. It is envisaged that both FTMS together with a dissociation strategy is essential, such as electron capture dissociation or possibly IR activation as well as independent. Digestion and peptide sequence to fill in any gaps in the template derivable from intact Protein dissociation. It is also envisaged that separation of homogenous intact isoforms will have to be separated by mass spectral strategies based on accurate selection of individual molecular weights from mixtures.
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会议论文
Role of novel onco-histone mutations in B-cell malignancies
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批准号:10226944
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项目类别:
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资助金额:$66.49万
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财政年份:2019
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负责人:CHARLES DAVID ALLIS
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依托单位:
Role of novel onco-histone mutations in B-cell malignancies
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批准号:9981709
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项目类别:
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资助金额:$66.49万
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财政年份:2019
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负责人:CHARLES DAVID ALLIS
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依托单位:
Role of Histone and Histone-like Mutations in the Oncogenesis of Human Cancers
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批准号:10024842
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项目类别:
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资助金额:$179.05万
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财政年份:2015
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负责人:CHARLES DAVID ALLIS
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依托单位:
Administrative Core
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批准号:10024847
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项目类别:
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资助金额:$4.69万
-
财政年份:2015
-
负责人:CHARLES DAVID ALLIS
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依托单位:
Role of Histone and Histone-like Mutations in the Oncogenesis of Human Cancers
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批准号:10269903
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项目类别:
-
资助金额:$146.13万
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财政年份:2015
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负责人:CHARLES DAVID ALLIS
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依托单位:
Oncohistones: Role of Histone H3 Mutations in the Oncogenesis of Pediatric Cancers
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批准号:9142300
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项目类别:
-
资助金额:$185.51万
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财政年份:2015
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负责人:CHARLES DAVID ALLIS
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依托单位:
Project 2: Elucidating Mechanisms of Chromatin Dysregulation by Oncohistones
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批准号:10024844
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项目类别:
-
资助金额:$27.88万
-
财政年份:2015
-
负责人:CHARLES DAVID ALLIS
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依托单位:
Project 2: Elucidating Mechanisms of Chromatin Dysregulation by Oncohistones
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批准号:10269905
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项目类别:
-
资助金额:$26.7万
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财政年份:2015
-
负责人:CHARLES DAVID ALLIS
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依托单位:
Administrative Core
-
批准号:10269908
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项目类别:
-
资助金额:$5.34万
-
财政年份:2015
-
负责人:CHARLES DAVID ALLIS
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依托单位:
Oncohistones: Role of Histone H3 Mutations in the Oncogenesis of Pediatric Cancers
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批准号:9217804
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项目类别:
-
资助金额:$3.43万
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财政年份:2015
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负责人:CHARLES DAVID ALLIS
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依托单位:
Dynamic Regulation of Methyl-arginine and Citrulline in Breast Cancer Cells
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批准号:8470191
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项目类别:
-
资助金额:$35.42万
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财政年份:2011
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负责人:CHARLES DAVID ALLIS
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依托单位:
Dynamic Regulation of Methyl-arginine and Citrulline in Breast Cancer Cells
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批准号:8690109
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项目类别:
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资助金额:$36.71万
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财政年份:2011
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负责人:CHARLES DAVID ALLIS
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依托单位:
INTERACTORS OF MYC ASSOCIATED ZINC FINGER PROTEIN (MAZ)
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批准号:8361528
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项目类别:
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资助金额:$0.13万
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财政年份:2011
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负责人:CHARLES DAVID ALLIS
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依托单位:
PROTEOME-WIDE PREDICTION OF ACETYLATION SUBSTRATES
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批准号:8361569
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项目类别:
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资助金额:$0.26万
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财政年份:2011
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负责人:CHARLES DAVID ALLIS
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依托单位:
JUMONJI DOMAIN INTERACTING PARTNERS
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批准号:8361527
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项目类别:
-
资助金额:$0.26万
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财政年份:2011
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负责人:CHARLES DAVID ALLIS
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依托单位:
Epigenomic Profile and Function of H3.3 Variant During Sensitive Period of Neurod
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批准号:8454543
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项目类别:
-
资助金额:$40.19万
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财政年份:2011
-
负责人:CHARLES DAVID ALLIS
-
依托单位:
Epigenomic Profile and Function of H3.3 Variant During Sensitive Period of Neurod
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批准号:8179528
-
项目类别:
-
资助金额:$42.64万
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财政年份:2011
-
负责人:CHARLES DAVID ALLIS
-
依托单位:
Dynamic Regulation of Methyl-arginine and Citrulline in Breast Cancer Cells
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批准号:8331539
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项目类别:
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资助金额:$36.71万
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财政年份:2011
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负责人:CHARLES DAVID ALLIS
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依托单位:
PROFILING PROTEIN INTERACTIONS OF H33, H32, AND H31
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批准号:8361532
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项目类别:
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资助金额:$0.13万
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财政年份:2011
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负责人:CHARLES DAVID ALLIS
-
依托单位:
Dynamic Regulation of Methyl-arginine and Citrulline in Breast Cancer Cells
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批准号:8161848
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项目类别:
-
资助金额:$36.2万
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财政年份:2011
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负责人:CHARLES DAVID ALLIS
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依托单位:
海外基金