ECOLOGICAL GENOMICS: NICHE CHARACTERIZATION OF BOECHERA STRICTA
ECOLOGICAL GENOMICS: NICHE CHARACTERIZATION OF BOECHERA STRICTA
批准号:
8360624
负责人:
DAVID SIEMENS
金额:
$2.11万
依托单位国家:
美国
项目类别:
财政年份:
2011
资助国家:
美国
项目状态:
已结题
起止时间:
2011-05-01 至 2012-04-30
关键词:
ArabidopsisBiomedical ResearchChemicalsEcologyEnvironmentFamilyFundingGenomicsGrantInbreedingInterdisciplinary StudyLaboratoriesMethodsNational Center for Research ResourcesPathway interactionsPatternPhysiologicalPopulationPrincipal InvestigatorQuantitative GeneticsRelative (related person)ResearchResearch InfrastructureResourcesRoleSourceSouth DakotaTranscriptUnited States National Institutes of HealthWaterbiological adaptation to stresscostfield studygenome-wideresearch studytooltrait
中文摘要
这个子项目是利用资源的许多研究子项目之一。
由NIH/NCRR资助的中心拨款提供。对子项目的主要支持
子项目的首席调查员可能是由其他来源提供的,
包括美国国立卫生研究院的其他来源。为子项目列出的总成本可能
表示该子项目使用的中心基础设施的估计数量,
不是由NCRR赠款提供给次级项目或次级项目工作人员的直接资金。
需要在自然环境环境中进行更多的研究,才能真正了解背后的机制
以确定群体的表达模式,并确定这是否源于特定适应性特征的遗传。这个
实验室实验和实地研究的结果不一致说明了跨学科的必要性
在自然环境中进行研究。
我们建立了一个近交系和母本家庭的共同花园,就在一个
评估已知应激反应途径和候选特征(防御性)的作用的自然补丁
在确定生态位边界和估计它们的进化潜力方面,生物多样性和生物多样性(包括化合物和水利用效率)。胡麻B.
Stricta是拟南芥的另一个野生近亲,使基因组工具如全基因组芯片的使用成为可能。
成绩单分析(见下文方法部分)。因此,我们正在结合数量遗传学的工具,
生理生态学、化学生态学和基因组学在这一领域的实验中了解的问题是生态位
对进化生态学家来说至关重要。2010年夏天,西门子博士接待了一位来自美国旧金山大学的研究员。
英文摘要
This subproject is one of many research subprojects utilizing the resources
provided by a Center grant funded by NIH/NCRR. Primary support for the subproject
and the subproject's principal investigator may have been provided by other sources,
including other NIH sources. The Total Cost listed for the subproject likely
represents the estimated amount of Center infrastructure utilized by the subproject,
not direct funding provided by the NCRR grant to the subproject or subproject staff.
The need for more studies in natural environmental settings is required to truly understand the mechanisms behind
expression patterns of a population and to determine if this is due to the inheritance of specific adaptive traits. The
inconsistency of results between laboratory experiments and field studies illustrates the need for interdisciplinary
studies in natural environments.
We established a common garden of inbred lines and maternal families of Boechera stricta within and just outside a
naturally occurring patch to evaluate the role of known stress response pathways and candidate traits (defensive
compounds and water use efficiency) in determining niche boundaries and to estimate their evolutionary potential. B.
stricta is another close wild relative of Arabidopsis, enabling the use of genomic tools such as microarrays for genomewide
transcript profiling (see below under Methods). Thus we are combining the tools of quantitative genetics,
physiological ecology, chemical ecology and genomics in this field experiment to understand issues of the niche that are
fundamentally important to evolutionary ecologists. Dr. Siemens hosted a fellow from USF during the summer of 2010.
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会议论文
FUNCTIONAL GENOMICS IN CLOSE WILD RELATIVES OF ARABIDOPSIS THALIANA
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批准号:7960310
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项目类别:
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资助金额:$3.47万
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财政年份:2009
-
负责人:DAVID SIEMENS
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依托单位:
FUNCTIONAL GENOMICS IN CLOSE WILD RELATIVES OF ARABIDOPSIS THALIANA
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批准号:7720213
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项目类别:
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资助金额:$2.87万
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财政年份:2008
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负责人:DAVID SIEMENS
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依托单位:
FUNCTIONAL GENOMICS IN CLOSE WILD RELATIVES OF ARABIDOPSIS THALIANA
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批准号:7610300
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项目类别:
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资助金额:$3.84万
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财政年份:2007
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负责人:DAVID SIEMENS
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依托单位:
FUNCTIONAL GENOMICS IN CLOSE WILD RELATIVES OF ARABIDOPSIS THALIANA
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批准号:7381692
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项目类别:
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资助金额:$4.4万
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财政年份:2006
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负责人:DAVID SIEMENS
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依托单位:
THE SIMULTANEOUS EVOLUTION OF DEFENSE AND COMPETITIVENESS: NATURAL SELECTION
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批准号:7170917
-
项目类别:
-
资助金额:$4.67万
-
财政年份:2005
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负责人:DAVID SIEMENS
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依托单位:
DEFENSE AND COMPETITION IN PLANTS
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批准号:6972510
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项目类别:
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资助金额:$0.44万
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财政年份:2004
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负责人:DAVID SIEMENS
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依托单位:
海外基金