Multiplexed high-content assay for toxicity profiling using live iPSC-derived cardiomyocyte lines with lineage-specific barcoding
Multiplexed high-content assay for toxicity profiling using live iPSC-derived cardiomyocyte lines with lineage-specific barcoding
批准号:
9761607
负责人:
Mary Ludlam
金额:
$82.16万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2018
资助国家:
美国
项目状态:
已结题
起止时间:
2018-08-15 至 2020-10-31
关键词:
AddressBiological AssayCRISPR/Cas technologyCardiacCardiac MyocytesCardiotoxicityCell LineCell LineageCellsCellular AssayCellular StructuresChemicalsClassificationContractsDataDevelopmentDrug ModelingsDrug toxicityEffectivenessEuropeEvaluationFoundationsGenerationsGoalsGovernment AgenciesHealth BenefitHeart AtriumHumanIn VitroIndustry StandardMachine LearningMedicineMethodsMicroscopyMitochondriaNodalNuclearPathway interactionsPatientsPharmaceutical PreparationsPharmacologic SubstancePhasePhenotypePhysiologicalPopulation HeterogeneityPositioning AttributePublic HealthReagentReporterReportingResearchSafetySarcomeresSiteSmall Business Innovation Research GrantSpecificitySpeedStructureTestingTimeToxic effectToxicity TestsToxicologyTrainingTreatment-Related CancerValidationVentricularWithdrawalWorkbasecell immortalizationclinical candidateclinical predictorscostcost effectivedrug discoverydrug testingenvironmental chemicalexpression vectorgenome editinghigh throughput screeningimmortalized cellimprovedinduced pluripotent stem cellinnovationinnovative technologiesmachine learning algorithmmodel developmentnew technologynovelnovel strategiesphase I trialpre-clinicalpredictive modelingpredictive testpredictive toolsprogramsresponsesafety assessmentscreeningsite-specific integrationsuccesstherapeutic developmenttherapeutic evaluationtool
中文摘要
项目总结/摘要
人类诱导多能干细胞(hiPSC)有望改变毒理学评估,但新的
需要使其功能和结构分析的方法来提高基于hiPSC的
用于预测和机制毒理学筛选的模型。我们的项目的具体内容满足了这一需求。
目的包括:(1)开发用于产生hiPSC衍生报告细胞的新平台;(2)
产生一组具有稳定的谱系特异性的HiPSC衍生的心肌细胞(hiPSC-CM),
荧光报告;和(3)实施和验证一个试点机器学习支持的预测
使用这些工具进行心脏毒性筛查。建议的工具配置为可扩展到其他毒理学-
相关途径和表型,使其处于独特的地位,以利用不断增长的商业需求
用于高通量预测毒理学分析。项目成果通过改善
能够快速识别特定心肌细胞谱系类型的责任,从而减少时间和成本,
精确的药物和环境化学品的心脏毒性。
英文摘要
Project Summary/Abstract
Human induced pluripotent stem cells (hiPSCs) are poised to transform toxicological evaluation, however new
approaches to enable their functional and structural profiling are needed to improve the utility of hiPSC -based
models for predictive and mechanistic toxicology screening. This need is addressed by our project’s Specific
Aims that encompass (1) development of a novel platform for generation of hiPSC-derived reporter cells; (2)
generation of a panel of multicolor hiPSC-derived cardiomyocytes (hiPSC-CMs) with stable lineage specific
fluorescent reporters; and (3) implementation and validation of a pilot machine learning-enabled predictive
cardiotoxicity screen using these tools. The proposed tools are configured to be extensible to other toxicology-
relevant pathways and phenotypes making it uniquely positioned to capitalize on the growing commercial need
for high-throughput predictive toxicology assays. The project deliverables benefit public health by improving the
ability to rapidly identify liabilities in specific cardiomyocyte lineage types, thus reducing the time and cost to
pinpoint cardiotoxicity of pharmaceutical and environmental chemicals.
期刊论文(0)
专著(0)
科研奖励(0)
会议论文
海外基金