"Be sustainable": EOSC-Life recommendations for implementation of FAIR principles in life science data handling.
"Be sustainable": EOSC-Life recommendations for implementation of FAIR principles in life science data handling.
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DOI：
10.15252/embj.2023115008
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发表时间：
2023-12-01
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影响因子：
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开放科学框架下生命科学界的主要目标和挑战是增加数据资源、软件工具和工作流程的重用和可持续性，特别是在大规模数据驱动的研究和计算分析中。在这里，我们提出了基于EOSC - life（欧洲生命科学开放科学云）联盟的协作、跨学科工作，产生和建立可持续生命科学资源的关键发现、程序、有效措施和建议。它汇集了13个欧洲生命科学研究基础设施，为支持生物和医学研究的开放数字空间奠定了基础。从27个选定的项目中吸取经验教训，我们描述了组织、技术、财务和法律/道德方面的挑战，这些挑战代表了生命科学可持续发展的主要障碍。我们展示了EOSC - Life如何根据FAIR（可查找性、可访问性、互操作性和可重用性）原则提供可持续数据管理模型，包括通过跨学科培训和最佳实践共享敏感和行业相关资源的解决方案。最后，我们说明了数据协调和协作工作如何促进工具、数据、解决方案的互操作性，并导致更好地理解生命科学中的概念、语义和功能。创建一个开放的合作研究空间，EOSC - Life，为可持续数据管理提供了最佳实践，以提高生命科学资源的使用。
The main goals and challenges for the life science communities in the Open Science framework are to increase reuse and sustainability of data resources, software tools, and workflows, especially in large‐scale data‐driven research and computational analyses. Here, we present key findings, procedures, effective measures and recommendations for generating and establishing sustainable life science resources based on the collaborative, cross‐disciplinary work done within the EOSC‐Life (European Open Science Cloud for Life Sciences) consortium. Bringing together 13 European life science research infrastructures, it has laid the foundation for an open, digital space to support biological and medical research. Using lessons learned from 27 selected projects, we describe the organisational, technical, financial and legal/ethical challenges that represent the main barriers to sustainability in the life sciences. We show how EOSC‐Life provides a model for sustainable data management according to FAIR (findability, accessibility, interoperability, and reusability) principles, including solutions for sensitive‐ and industry‐related resources, by means of cross‐disciplinary training and best practices sharing. Finally, we illustrate how data harmonisation and collaborative work facilitate interoperability of tools, data, solutions and lead to a better understanding of concepts, semantics and functionalities in the life sciences. Creating a space for open collaborative research, EOSC‐Life, suggests best practices for sustainable data management for enhanced usage of life science resources.
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影响因子：
2.3
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通讯作者：
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DOI：
10.1016/j.xgen.2021.100028
发表时间：
2021-11-10
期刊：
Cell genomics
影响因子：
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作者：
Lawson J;Cabili MN;Kerry G;Boughtwood T;Thorogood A;Alper P;Bowers SR;Boyles RR;Brookes AJ;Brush M;Burdett T;Clissold H;Donnelly S;Dyke SOM;Freeberg MA;Haendel MA;Hata C;Holub P;Jeanson F;Jene A;Kawashima M;Kawashima S;Konopko M;Kyomugisha I;Li H;Linden M;Rodriguez LL;Morita M;Mulder N;Muller J;Nagaie S;Nasir J;Ogishima S;Ota Wang V;Paglione LD;Pandya RN;Parkinson H;Philippakis AA;Prasser F;Rambla J;Reinold K;Rushton GA;Saltzman A;Saunders G;Sofia HJ;Spalding JD;Swertz MA;Tulchinsky I;van Enckevort EJ;Varma S;Voisin C;Yamamoto N;Yamasaki C;Zass L;Guidry Auvil JM;Nyrönen TH;Courtot M
通讯作者：
Courtot M
影响因子：
9.8
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影响因子：
4.6
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通讯作者：
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影响因子：
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作者：
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通讯作者：
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