Applications of genome-scale metabolic reconstructions.

Applications of genome-scale metabolic reconstructions.
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DOI:
10.1038/msb.2009.77
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发表时间:
2009
影响因子:
9.9
通讯作者:
--
中科院分区:
生物学1区
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--
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自从十年前第一个基因组规模重建发表以来,基因组规模代谢重建的可用性和实用性呈爆炸式增长。现在已经针对多种生物体建立了重建,并用于五个主要目的:(1)高通量数据的情境化,(2)代谢工程的指导,(3)指导假设驱动的发现,(4)多物种关系的询问,以及(5)网络属性发现。在这篇综述中,我们研究了基因组规模代谢重建的许多用途和未来方向,并强调了该领域将对生物学许多领域产生最大影响的趋势和机遇。
The availability and utility of genome-scale metabolic reconstructions have exploded since the first genome-scale reconstruction was published a decade ago. Reconstructions have now been built for a wide variety of organisms, and have been used toward five major ends: (1) contextualization of high-throughput data, (2) guidance of metabolic engineering, (3) directing hypothesis-driven discovery, (4) interrogation of multi-species relationships, and (5) network property discovery. In this review, we examine the many uses and future directions of genome-scale metabolic reconstructions, and we highlight trends and opportunities in the field that will make the greatest impact on many fields of biology.
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