The complete chloroplast genome of Akebia longeracemosa (Lardizabalaceae).

The complete chloroplast genome of Akebia longeracemosa (Lardizabalaceae).
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长木通 (Lardizabalaceae) 的完整叶绿体基因组

DOI:
10.1080/23802359.2021.1884018
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发表时间:
2021-03-11
期刊:
Mitochondrial DNA. Part B, Resources
影响因子:
--
通讯作者:
Li T
Li T
中科院分区:
其他
文献类型:
--
作者:
Xiao X;Deng H;Xu L;Wen F;Han X;Liao L;Li T

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测定了中国特有的雌雄同株木本藤本植物长eracemosa的叶绿体全基因组。基因组总大小为158,020 bp,包含86,659 bp的大单拷贝区,19,059 bp的小单拷贝区和26,151 bp的一对反向重复。叶绿体基因组编码113个独特基因,其中蛋白质编码基因79个,tRNA基因30个,rRNA基因4个。其中15个基因各含1个内含子,3个基因含2个内含子。总GC含量为38.7%,而LSC区、SSC区和IR区的GC含量分别为37.1、33.6和43.1%。系统发育分析表明,长角麻与三叶麻亲缘关系较近。
The complete chloroplast genome of Akebia longeracemosa, a monoecious woody vine endemic to China, was determined. The total genome size is 158,020 bp, containing a large single copy region of 86,659 bp, a small single copy region of 19,059 bp, and a pair of inverted repeats of 26,151 bp. The chloroplast genome encodes 113 unique genes, including 79 protein-coding genes, 30 tRNA genes and 4 rRNA genes. Among them, fifteen genes have one intron each, and three genes contain two introns. The overall GC content is 38.7%, while the corresponding values of LSC, SSC, and IR regions are 37.1, 33.6, and 43.1%, respectively. Phylogenetic analysis showed that A. longeracemosa was closely related to A. trifoliata.
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发表时间: 2013-04
影响因子: 10.7
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