PDBe: Protein Data Bank in Europe.

PDBe: Protein Data Bank in Europe.
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DOI:
10.1093/nar/gkr998
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发表时间:
2012-01
影响因子:
14.9
通讯作者:
Kleywegt GJ
Kleywegt GJ
中科院分区:
生物学2区
文献类型:
--
作者:
Velankar S;Alhroub Y;Best C;Caboche S;Conroy MJ;Dana JM;Fernandez Montecelo MA;van Ginkel G;Golovin A;Gore SP;Gutmanas A;Haslam P;Hendrickx PM;Heuson E;Hirshberg M;John M;Lagerstedt I;Mir S;Newman LE;Oldfield TJ;Patwardhan A;Rinaldi L;Sahni G;Sanz-García E;Sen S;Slowley R;Suarez-Uruena A;Swaminathan GJ;Symmons MF;Vranken WF;Wainwright M;Kleywegt GJ

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欧洲蛋白质数据库(PDBe; pdbe.org)是全球PDB组织(wwwPDB; wwpdb.org)的合作伙伴,因此积极参与管理生物大分子结构数据的单一全球档案,PDB。此外,PDBe还开发工具、服务和资源,使生物医学界更容易获得与结构相关的数据。在这里,我们描述了最近开发的,扩展或改进的服务,包括一个动画的结构演示窗口小部件(PDBportfolio),一个窗口小部件,以图形方式显示的任何UniProt序列的PDB(UniPDB),化学和分类为基础的PDB存档浏览器(PDBeXplore)的覆盖范围,和一个工具,用于交互式可视化的NMR结构,相应的实验数据以及验证和分析结果(Vivaldi)。
The Protein Data Bank in Europe (PDBe; pdbe.org) is a partner in the Worldwide PDB organization (wwPDB; wwpdb.org) and as such actively involved in managing the single global archive of biomacromolecular structure data, the PDB. In addition, PDBe develops tools, services and resources to make structure-related data more accessible to the biomedical community. Here we describe recently developed, extended or improved services, including an animated structure-presentation widget (PDBportfolio), a widget to graphically display the coverage of any UniProt sequence in the PDB (UniPDB), chemistry- and taxonomy-based PDB-archive browsers (PDBeXplore), and a tool for interactive visualization of NMR structures, corresponding experimental data as well as validation and analysis results (Vivaldi).
DOI: 10.1093/nar/gkr811
发表时间: 2012-01
影响因子: 14.9
作者:
Kinjo AR;Suzuki H;Yamashita R;Ikegawa Y;Kudou T;Igarashi R;Kengaku Y;Cho H;Standley DM;Nakagawa A;Nakamura H
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发表时间: 2008-01
影响因子: 14.9
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发表时间: 2008-01-01
影响因子: 1.8
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发表时间: 2011-01
影响因子: 2.7
作者:
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DOI: 10.1186/1471-2105-9-312
发表时间: 2008-07-17
期刊: BMC bioinformatics
影响因子: 3
作者:
Golovin A;Henrick K
通讯作者: Henrick K