Gitools: analysis and visualisation of genomic data using interactive heat-maps.

Gitools: analysis and visualisation of genomic data using interactive heat-maps.
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DOI:
10.1371/journal.pone.0019541
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发表时间:
2011
期刊:
影响因子:
3.7
通讯作者:
Lopez-Bigas N
Lopez-Bigas N
中科院分区:
综合性期刊3区
文献类型:
--
作者:
Perez-Llamas C;Lopez-Bigas N

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数据和结果的直观可视化在基因组学中非常重要,特别是当需要分析和比较许多条件时。热图已被证明对于生物数据的表示非常有用。在这里,我们介绍了Gitools(www.gitools.org),这是一个开源工具,用于执行分析并将数据和结果可视化为交互式热图。Gitools包含来自多个来源的数据导入系统(即IntOGen,Biomart,KEGG,Gene Ontology),这些系统有助于将新数据与以前的知识整合在一起。
Intuitive visualization of data and results is very important in genomics, especially when many conditions are to be analyzed and compared. Heat-maps have proven very useful for the representation of biological data. Here we present Gitools (http://www.gitools.org), an open-source tool to perform analyses and visualize data and results as interactive heat-maps. Gitools contains data import systems from several sources (i.e. IntOGen, Biomart, KEGG, Gene Ontology), which facilitate the integration of novel data with previous knowledge.
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