The UniProt-GO Annotation database in 2011.
The UniProt-GO Annotation database in 2011.
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DOI:
10.1093/nar/gkr1048
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发表时间:
2012-01
影响因子:
14.9
通讯作者:
Apweiler R
中科院分区:
文献类型:
--
作者:
Dimmer EC;Huntley RP;Alam-Faruque Y;Sawford T;O'Donovan C;Martin MJ;Bely B;Browne P;Mun Chan W;Eberhardt R;Gardner M;Laiho K;Legge D;Magrane M;Pichler K;Poggioli D;Sehra H;Auchincloss A;Axelsen K;Blatter MC;Boutet E;Braconi-Quintaje S;Breuza L;Bridge A;Coudert E;Estreicher A;Famiglietti L;Ferro-Rojas S;Feuermann M;Gos A;Gruaz-Gumowski N;Hinz U;Hulo C;James J;Jimenez S;Jungo F;Keller G;Lemercier P;Lieberherr D;Masson P;Moinat M;Pedruzzi I;Poux S;Rivoire C;Roechert B;Schneider M;Stutz A;Sundaram S;Tognolli M;Bougueleret L;Argoud-Puy G;Cusin I;Duek-Roggli P;Xenarios I;Apweiler R
The GO annotation dataset provided by the UniProt Consortium (GOA: http://www.ebi.ac.uk/GOA) is a comprehensive set of evidenced-based associations between terms from the Gene Ontology resource and UniProtKB proteins. Currently supplying over 100 million annotations to 11 million proteins in more than 360 000 taxa, this resource has increased 2-fold over the last 2 years and has benefited from a wealth of checks to improve annotation correctness and consistency as well as now supplying a greater information content enabled by GO Consortium annotation format developments. Detailed, manual GO annotations obtained from the curation of peer-reviewed papers are directly contributed by all UniProt curators and supplemented with manual and electronic annotations from 36 model organism and domain-focused scientific resources. The inclusion of high-quality, automatic annotation predictions ensures the UniProt GO annotation dataset supplies functional information to a wide range of proteins, including those from poorly characterized, non-model organism species. UniProt GO annotations are freely available in a range of formats accessible by both file downloads and web-based views. In addition, the introduction of a new, normalized file format in 2010 has made for easier handling of the complete UniProt-GOA data set.
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影响因子:
14.9
作者:
Gene Ontology Consortium
通讯作者:
Gene Ontology Consortium
影响因子:
5.3
作者:
Lovering, Ruth C.;Dimmer, Emily C.;Talmud, Philippa J.
通讯作者:
Talmud, Philippa J.
影响因子:
14.9
作者:
Davidsen T;Beck E;Ganapathy A;Montgomery R;Zafar N;Yang Q;Madupu R;Goetz P;Galinsky K;White O;Sutton G
通讯作者:
Sutton G
影响因子:
7
作者:
Vilella, Albert J.;Severin, Jessica;Birney, Ewan
通讯作者:
Birney, Ewan
影响因子:
3
作者:
Deegan (nee Clark), Jennifer I.;Dimmer, Emily C.;Mungall, Christopher J.
通讯作者:
Mungall, Christopher J.