Metadata matters: access to image data in the real world.

Metadata matters: access to image data in the real world.
复制标题

DOI:
10.1083/jcb.201004104
复制
发表时间:
2010-05-31
期刊:
The Journal of cell biology
影响因子:
--
通讯作者:
Swedlow JR
Swedlow JR
中科院分区:
其他
文献类型:
--
作者:
Linkert M;Rueden CT;Allan C;Burel JM;Moore W;Patterson A;Loranger B;Moore J;Neves C;Macdonald D;Tarkowska A;Sticco C;Hill E;Rossner M;Eliceiri KW;Swedlow JR

文献摘要

参考文献

被引文献

相似文献

在生物科学中,数据共享对于防止工作重复、促进科学完整性以及促进和传播科学发现十分重要。共享需要集中的存储库,提交和利用这些资源需要通用的数据格式。这对于多维显微图像数据尤其具有挑战性,这些数据是从具有无数专有文件格式(PFF)的各种平台获取的。在本文中,我们描述了一个开放的标准格式,我们已经开发的显微图像数据。我们呼吁社区使用开放的图像数据标准,并坚持所有成像平台都支持这些文件格式。这将为开放的图像数据存储库奠定基础。
Data sharing is important in the biological sciences to prevent duplication of effort, to promote scientific integrity, and to facilitate and disseminate scientific discovery. Sharing requires centralized repositories, and submission to and utility of these resources require common data formats. This is particularly challenging for multidimensional microscopy image data, which are acquired from a variety of platforms with a myriad of proprietary file formats (PFFs). In this paper, we describe an open standard format that we have developed for microscopy image data. We call on the community to use open image data standards and to insist that all imaging platforms support these file formats. This will build the foundation for an open image data repository.
DOI: 10.1038/nature08869
发表时间: 2010-04-01
期刊: Nature
影响因子: 64.8
作者:
通讯作者: --
DOI: 10.1016/j.cell.2007.08.003
发表时间: 2007-10-05
期刊: CELL
影响因子: 64.5
作者:
Lecuyer, Eric;Yoshida, Hideki;Krause, Henry M.
通讯作者: Krause, Henry M.
DOI: 10.1093/nar/gkm797
发表时间: 2008-01-01
影响因子: 14.9
作者:
Haudry, Yannick;Berube, Hugo;Henrich, Thorsten
通讯作者: Henrich, Thorsten
DOI: 10.1093/bioinformatics/btp699
发表时间: 2010-02-15
期刊: BIOINFORMATICS
影响因子: 5.8
作者:
Kvilekval, Kristian;Fedorov, Dmitry;Manjunath, B. S.
通讯作者: Manjunath, B. S.
DOI: 10.1083/jcb.200811132
发表时间: 2008-12-15
期刊: The Journal of Cell Biology
影响因子: --
作者:
Hill E
通讯作者: Hill E