The complete chloroplast genomes of rare medical herb Glycyrrhiza inflata and its relative G. aspera (Fabaceae).

The complete chloroplast genomes of rare medical herb Glycyrrhiza inflata and its relative G. aspera (Fabaceae).
复制标题

珍稀药材膨胀甘草及其近缘种甘草(豆科)叶绿体全基因组

DOI:
10.1080/23802359.2019.1691067
复制
发表时间:
2019-11-18
期刊:
Mitochondrial DNA. Part B, Resources
影响因子:
--
通讯作者:
Chen HF
Chen HF
中科院分区:
其他
文献类型:
--
作者:
Duan L;Zhang ZR;Deng SW;Chen HF

文献摘要

参考文献

相似文献

摘要膨胀甘草是一种受威胁的多年生药用草本植物,在西北中国和蒙古国均有分布。它的盟友种G.aspera从中国北部到土耳其广泛分布。利用Illumina HiSeq X-Ten平台对完整的叶绿体基因组进行测序。每个基因组都缺少一个反向重复序列(IR)区,包含76个蛋白质编码基因、30个tRNAs基因和4个rRNAs。总GC含量均为34.3%。根据15种植物的叶绿体全基因组构建的系统发育树表明,Aspera和G.inflata属于一个单系甘草属,嵌套在豆科凤冠花亚科的IRLC群中。
Abstract Glycyrrhiza inflata is a threatened perennial herb with medicinal value, which restricts in NW China and Mongolia. Its ally species, G. aspera, is widely distributed from northern China to Turkey. The complete chloroplast genomes were sequenced using the Illumina Hiseq X-Ten platform. Each of the genomes lacks an inverted repeat (IR) region, containing 76 protein-coding genes, 30 tRNAs genes, and 4 rRNAs. The overall GC contents are both 34.3%. A phylogenetic tree based on the whole chloroplast genomes of 15 species indicated that G. aspera and G. inflata belonged to a monophyletic Glycyrrhiza, which was nested in IRLC group of the subfamily Papilionoideae (Leguminosae).
DOI: 10.1038/srep28559
发表时间: 2016-07-05
期刊: Scientific reports
影响因子: 4.6
作者:
Yao X;Tan YH;Liu YY;Song Y;Yang JB;Corlett RT
通讯作者: Corlett RT
DOI: 10.1093/bioinformatics/bth352
发表时间: 2004-11-22
期刊: BIOINFORMATICS
影响因子: 5.8
作者:
Wyman, SK;Jansen, RK;Boore, JL
通讯作者: Boore, JL
DOI: 10.1093/molbev/msu300
发表时间: 2015-01
影响因子: 10.7
作者:
Nguyen LT;Schmidt HA;von Haeseler A;Minh BQ
通讯作者: Minh BQ
DOI: 10.1089/cmb.2012.0021
发表时间: 2012-05-01
影响因子: 1.7
作者:
Bankevich, Anton;Nurk, Sergey;Pevzner, Pavel A.
通讯作者: Pevzner, Pavel A.
DOI: 10.1093/molbev/mst010
发表时间: 2013-04
影响因子: 10.7
作者:
Katoh K;Standley DM
通讯作者: Standley DM