Nine best practices for research software registries and repositories.

Nine best practices for research software registries and repositories.
复制标题

DOI:
10.7717/peerj-cs.1023
复制
发表时间:
2022
影响因子:
3.8
通讯作者:
Allen, Alice
Allen, Alice
中科院分区:
计算机科学4区
文献类型:
--
作者:
Garijo, Daniel;Menager, Herve;Hwang, Lorraine;Trisovic, Ana;Hucka, Michael;Morrell, Thomas;Allen, Alice

文献摘要

参考文献

被引文献

相似文献

科学软件注册和存储库提高了软件的可查找性和研究透明度,为软件引用提供了信息,并在广泛的学科范围内促进了计算方法的保存。注册表和存储库通过支持研究的再现性和可复制性发挥了关键作用,但是开发它们需要努力,并且很少有指导方针可以帮助这些资源的潜在创建者。为了满足这一需求,召开了一个特别工作组,以总结现有资源管理人员在为所有利益攸关方设定期望方面的经验。在本文中,我们将描述最终的最佳实践,其中包括定义管理单个注册中心和存储库的范围、策略和规则,以及开发过程中的背景、示例和协作工作。我们相信,建立具体的政策,如这里所展示的,将有助于其他科学软件注册和存储库更好地服务于他们的用户和他们的学科。
Scientific software registries and repositories improve software findability and research transparency, provide information for software citations, and foster preservation of computational methods in a wide range of disciplines. Registries and repositories play a critical role by supporting research reproducibility and replicability, but developing them takes effort and few guidelines are available to help prospective creators of these resources. To address this need, the convened a Task Force to distill the experiences of the managers of existing resources in setting expectations for all stakeholders. In this article, we describe the resultant best practices which include defining the scope, policies, and rules that govern individual registries and repositories, along with the background, examples, and collaborative work that went into their development. We believe that establishing specific policies such as those presented here will help other scientific software registries and repositories better serve their users and their disciplines.
DOI: 10.1186/gb-2004-5-10-r80
发表时间: 2004
期刊: Genome biology
影响因子: 12.3
作者:
Gentleman RC;Carey VJ;Bates DM;Bolstad B;Dettling M;Dudoit S;Ellis B;Gautier L;Ge Y;Gentry J;Hornik K;Hothorn T;Huber W;Iacus S;Irizarry R;Leisch F;Li C;Maechler M;Rossini AJ;Sawitzki G;Smith C;Smyth G;Tierney L;Yang JY;Zhang J
通讯作者: Zhang J
DOI: 10.1038/s41567-018-0342-2
发表时间: 2019-02-01
期刊: NATURE PHYSICS
影响因子: 19.6
作者:
Chen, Xiaoli;Dallmeier-Tiessen, Suenje;Neubert, Sebastian
通讯作者: Neubert, Sebastian
DOI: 10.1016/j.future.2017.12.029
发表时间: 2019-05-01
影响因子: 7.5
作者:
Brinckman, Adam;Chard, Kyle;Turner, Kandace
通讯作者: Turner, Kandace
DOI: 10.1109/mcse.2019.2949413
发表时间: 2020-01-01
影响因子: 2.1
作者:
Alliez, Pierre;Di Cosmo, Roberto;Rougier, Nicolas
通讯作者: Rougier, Nicolas
DOI: 10.1093/gigascience/giaa157
发表时间: 2021-01-27
期刊: GigaScience
影响因子: 9.2
作者:
Ison J;Ienasescu H;Rydza E;Chmura P;Rapacki K;Gaignard A;Schwämmle V;van Helden J;Kalaš M;Ménager H
通讯作者: Ménager H