Complete chloroplast genome of a subtropical fruit tree Macadamia ternifolia (Proteaceae).

Complete chloroplast genome of a subtropical fruit tree Macadamia ternifolia (Proteaceae).
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亚热带果树澳洲坚果(山龙眼科)的完整叶绿体基因组

DOI:
10.1080/23802359.2017.1390401
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发表时间:
2017-10-17
期刊:
Mitochondrial DNA. Part B, Resources
影响因子:
--
通讯作者:
Shi C
Shi C
中科院分区:
其他
文献类型:
--
作者:
Liu J;Niu YF;Ni SB;He XY;Shi C

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Macadamia ternifolia是Proteaceae科的亚热带果树。叶绿体基因组序列在植物系统发育和群体遗传研究中的分子标记开发中起着重要作用。本研究报道了M.三叶草。叶绿体基因组长159,669 bp,包括113个基因。其LSC、SSC和IR区域分别为88,072、18,801和26,408 bp长。序列比较M. ternifolia和M.全缘叶(integrifolia)的基因组序列具有很高的保守性,只有少量的单核苷酸多态性(SNPs)和插入/缺失(InDels)。
Macadamia ternifolia is a subtropical fruit tree of the family Proteaceae. Chloroplast genome sequences play a significant role in the development of molecular markers in plant phylogenetic and population genetic studies. In this study, we report the complete chloroplast genome sequence of M. ternifolia. The chloroplast genome is 159,669 bp long and includes 113 genes. Its LSC, SSC, and IR regions are 88,072, 18,801, and 26,408 bp long, respectively. Sequence comparison of M. ternifolia and M. integrifolia indicates large sequence conservation between these two species, only few sequence variations including single nucleotide polymorphisms (SNPs) and inserts/deletes (InDels) were detected.
DOI: 10.1093/bioinformatics/bth352
发表时间: 2004-11-22
期刊: BIOINFORMATICS
影响因子: 5.8
作者:
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发表时间: 2014
期刊: BMC genomics
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