DoBISCUIT: a database of secondary metabolite biosynthetic gene clusters.

DoBISCUIT: a database of secondary metabolite biosynthetic gene clusters.
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DOI:
10.1093/nar/gks1177
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发表时间:
2013-01
影响因子:
14.9
通讯作者:
Fujita N
Fujita N
中科院分区:
生物学2区
文献类型:
--
作者:
Ichikawa N;Sasagawa M;Yamamoto M;Komaki H;Yoshida Y;Yamazaki S;Fujita N

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本文介绍了DoBISCUIT(Database of BIOSynthesis clusters CUrated and Integrated,http://www.bio.nite.go.jp/pks/),一个基于文献的人工整理的次生代谢物生物合成基因簇数据库。细菌次级代谢产物通常表现出非常重要的活性,并且可以作为先导化合物和/或药物开发的候选物。每种次级代谢物的生物合成都是由许多酶催化的,这些酶通常由基因簇编码。虽然许多科学论文描述了这样的基因簇,但基因信息并不总是以全面的方式描述,并且相关信息很少被整合。DoBISCUIT整合了最新的文献信息,并提供了与基因簇相关的标准化基因/模块/域描述。
This article introduces DoBISCUIT (Database of BIoSynthesis clusters CUrated and InTegrated, http://www.bio.nite.go.jp/pks/), a literature-based, manually curated database of gene clusters for secondary metabolite biosynthesis. Bacterial secondary metabolites often show pharmacologically important activities and can serve as lead compounds and/or candidates for drug development. Biosynthesis of each secondary metabolite is catalyzed by a number of enzymes, usually encoded by a gene cluster. Although many scientific papers describe such gene clusters, the gene information is not always described in a comprehensive manner and the related information is rarely integrated. DoBISCUIT integrates the latest literature information and provides standardized gene/module/domain descriptions related to the gene clusters.
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影响因子: 5.1
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