The complete mitochondrial genome of ostorhinchus fleurieu (kurtiformes: Apogonidae) and phylogenetic studies of apogoninae.

The complete mitochondrial genome of ostorhinchus fleurieu (kurtiformes: Apogonidae) and phylogenetic studies of apogoninae.
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Ostorhinchus fleurieu(kurtiformes:Apogonidae)的完整线粒体基因组和 apogoninae 的系统发育研究

DOI:
10.1080/23802359.2019.1679681
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发表时间:
2019-10-23
期刊:
Mitochondrial DNA. Part B, Resources
影响因子:
--
通讯作者:
Liu B
Liu B
中科院分区:
其他
文献类型:
--
作者:
Zhu K;Gao Y;Yuan P;Cao P;Ying X;Tao H;Liu B

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首次确定了长16521 bp的东翅猴线粒体全基因组,包含13个蛋白编码基因、2个rRNA基因、22个tRNA基因、1个推定控制区和1个光链复制起点。总碱基组成包括C(29.2%)、A(26.7%)、T(26.7%)和G(17.4%)。13个PCGs共编码3800个氨基酸,除以GTG开头的COI外,其余12个使用起始密码子ATG。其中COII、ND4和Cytb 3个蛋白编码基因均以完整终止密码子结束,用t表示。构建了基于邻域连接法的系统发育树,分析了apoogoninae的内部关系,为该物种的管理提供了依据。
The complete mitochondrial genome ofOstorhinchus fleurieuwas first determined, which was 16,521 bp in length, containing 13 protein-coding genes, two rRNA genes, 22 tRNA genes, a putative control region and one origin of replication on the light-strand. The overall base composition included C(29.2%), A(26.7%), T(26.7%) and G(17.4%). Moreover, the 13 PCGs encoded 3800 amino acids in total, twelve of which used the initiation codon ATG except for COI started with GTG. Most of them ended with complete stop codon, whereas three protein-coding genes (COII, ND4 and Cytb) used incomplete stop codon and represented as T. The phylogenetic tree based on the Neighbour Joining method was constructed to provide relationship within Apogoninae, which could be a useful basis for management of this species.
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发表时间: 1981-01-01
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