The complete chloroplast genome sequences of an endemic species of Urticaceae (Debregeasia hekouensis).
The complete chloroplast genome sequences of an endemic species of Urticaceae (Debregeasia hekouensis).
复制标题
荨麻疹的特有物种（Debregeasia hekouensis）的完整叶绿体基因组序列。
DOI：
10.1080/23802359.2021.1993761
复制
发表时间：
2021
期刊：
影响因子：
--
通讯作者：
Wu ZY
中科院分区：
文献类型：
--
作者：
Sun ZY;Liu J;Wambulwa MC;Li ZH;Wu ZY
河口水麻（Debregeasia hekouensis）为荨麻科荨麻属植物，是云南省河口县特有植物。为了给开发有效的分子标记提供依据，本研究测定了杜氏藻叶绿体基因组全序列。hekouensis在本研究中。叶绿体基因组全长155，941 bp，具有典型的四分体结构，一对反向重复序列（长度为25，664 bp）被一个19，085 bp的小单拷贝（SSC）区和一个85，528 bp的大单拷贝（LSC）区分隔。cp基因组包含112个基因，其中蛋白质编码基因78个，tRNA基因30个，rRNA基因4个。全cp基因组、LSC区、SSC区和IR区的GC含量分别为36.3%、34.0%、29.4%和42.7%。系统发育分析表明，D.河口麻与东方麻和鳞麻在进化上更接近。
Debregeasia hekouensis, which belongs to the nettle family (Urticaceae), is a local endemic species in Hekou County, Yunnan Province, China. To provide a basis for the development of effective molecular markers for its conservation, we sequenced the chloroplast (cp) genome of D. hekouensis in the present study. The total length of the chloroplast(cp) genome was 155,941 bp, and exhibited a typical quadripartite structure, with a pair of IRs (inverted repeats; 25,664 bp in length) being separated by a small single copy (SSC) region of 19,085 bp and a large single copy (LSC) region of 85,528 bp. The cp genome contained a total of 112 genes, including 78 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The GC content of the entire cp genome, LSC region, SSC region, and IR region was 36.3%, 34.0%, 29.4%, and 42.7%, respectively. Phylogenetic analysis indicated that D. hekouensis is evolutionarily closer to Debregeasia orientalis and Debregeasia squamata.
登录
查看更多内容
影响因子：
10.7
作者：
Nguyen LT;Schmidt HA;von Haeseler A;Minh BQ
通讯作者：
Minh BQ
影响因子：
10.7
作者：
Katoh K;Standley DM
通讯作者：
Standley DM
影响因子：
48
作者：
Kalyaanamoorthy S;Minh BQ;Wong TKF;von Haeseler A;Jermiin LS
通讯作者：
Jermiin LS
影响因子：
3.7
作者：
Wang, Ruo-Nan;Milne, Richard, I;Wu, Zeng-Yuan
通讯作者：
Wu, Zeng-Yuan
影响因子：
4.1
作者：
Wu, Zeng-Yuan;Monro, Alex K.;Li, De-Zhu
通讯作者：
Li, De-Zhu