The complete mitochondrial genome of Sarcophaga brevicornis (Diptera: Sarcophagidae).

The complete mitochondrial genome of Sarcophaga brevicornis (Diptera: Sarcophagidae).
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Sarcophaga brevicornis 的完整线粒体基因组(双翅目:Sarcophagidae)

DOI:
10.1080/23802359.2019.1644561
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发表时间:
2019-07-24
期刊:
Mitochondrial DNA. Part B, Resources
影响因子:
--
通讯作者:
Guo Y
Guo Y
中科院分区:
其他
文献类型:
--
作者:
Zhang C;Shiwen W;Shang Y;Shen X;Guo Y

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摘要短角麻蝇(双翅目:麻蝇科)分布广泛,普遍存在,与人共生,具有重要的法医学意义。完整的线粒体基因组(mitogenome)的S。在这项研究中首次对短角羚进行了测序和组装。该基因组全长15,152 bp,包括13个蛋白质编码基因(13个PCG)、2个核糖体RNA基因(2个rRNA)、22个转运RNA基因(22个tRNA)和一个AT富集区。其核苷酸组成为A 39.0%、C 12.7%、G 10.6%、T 37.7%。此外,系统发育关系的S。根据13个PCG对短角麻蝇和已发表的麻蝇进行了评价。结果表明,S.短角麻蝇与其它麻蝇种明显分离,但与相似麻蝇种接近。本研究为麻蝇科昆虫的遗传结构和系统发育分析提供了重要的数据参考。
Abstract Sarcophaga brevicornis (Diptera: Sarcophagidae) was of utmost forensic importance due to their wide distribution, ubiquitous, and synanthropic nature. The complete mitochondrial genome (mitogenome) of S. brevicornis was first sequenced and assembled in this study. The length of circular mitogenome was 15,152 bp, which showed in a typical arthropod genome, including 13 protein-coding genes (13 PCGs), two ribosomal RNA (two rRNA) genes, 22 transfer RNA (22 tRNA) genes, and an AT-rich region. Its nucleotide composition was A 39.0%, C 12.7%, G 10.6%, and T 37.7%. Furthermore, phylogenetic relationships of S. brevicornis and the published sarcophagid species were evaluated based on 13 PCGs. The results indicated that S. brevicornis was clearly separated from the other sarcophagid species, but it was closed to the species of Sarcophaga similis. This study provided a significant database reference for genetic structure and phylogenetic analysis of Sarcophagidae.
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DOI: 10.1080/20961790.2018.1432099
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