SlicerSALT: From Medical Images to Quantitative Insights of Anatomy.

SlicerSALT: From Medical Images to Quantitative Insights of Anatomy.
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SlicerSALT:从医学图像到解剖学的定量见解。

DOI:
10.1007/978-3-031-46914-5_16
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发表时间:
2023
期刊:
Shape in medical imaging : International Workshop, ShapeMI 2023, held in conjunction with MICCAI 2023, Vancouver, BC, Canada, October 8, 2023, Proceedings. ShapeMI (Workshop) (2023 : Vancouver, B.C.)
影响因子:
--
通讯作者:
Paniagua,Beatriz
Paniagua,Beatriz
中科院分区:
--
文献类型:
--
作者:
Vicory,Jared;Han,Ye;Prieto,JuanCarlos;Allemang,David;Leclercq,Mathieu;Bowley,Connor;Scheirich,Harald;Fillion-Robin,Jean-Christophe;Pizer,Steve;Fishbaugh,James;Gerig,Guido;Styner,Martin;Paniagua,Beatriz

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三维(3D)形状是理解我们周围物理对象的核心。在生物医学领域,形状分析已被证明在量化解剖结构如何随时间和疾病而变化方面是强大的。形状分析工具(SALT)是作为一种传播先进形状方法的工具而创建的,它是一种开源、免费和全面的软件工具。我们提出了我们的形状分析软件包的新发展,包括易于解释的统计方法,以更好地利用SALT的形状表示中包含的定量信息。我们还展示了SlicerPipelines,这是一个通过促进大规模数据集的分析,为非专家用户自动化工作流程并允许分发可重复工作流程来提高SALT可用性的模块。
Three-dimensional (3D) shape lies at the core of understanding the physical objects that surround us. In the biomedical field, shape analysis has been shown to be powerful in quantifying how anatomy changes with time and disease. The Shape AnaLysis Toolbox (SALT) was created as a vehicle for disseminating advanced shape methodology as an open source, free, and comprehensive software tool. We present new developments in our shape analysis software package, including easy-to-interpret statistical methods to better leverage the quantitative information contained in SALT’s shape representations. We also show SlicerPipelines, a module to improve the usability of SALT by facilitating the analysis of large-scale data sets, automating workflows for non-expert users, and allowing the distribution of reproducible workflows.
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