The European Bioinformatics Institute's data resources 2014.

The European Bioinformatics Institute's data resources 2014.
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DOI:
10.1093/nar/gkt1206
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发表时间:
2014-01
影响因子:
14.9
通讯作者:
Thornton J
Thornton J
中科院分区:
生物学2区
文献类型:
--
作者:
Brooksbank C;Bergman MT;Apweiler R;Birney E;Thornton J

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分子生物学从一开始就处于“大数据”革命的核心,从1965年Dayhoff的“蛋白质序列和结构图谱”的出版到20世纪90年代末和21世纪初的人类基因组计划,再到今天的人口规模测序计划,获取生物数据的需求是一条共同的线。欧洲生物信息学研究所(EMBL-EBI; http://www.ebi.ac.uk)是全球提供全面、综合分子数据集免费访问的三个组织之一。在这里,我们总结了支持这些公共资源开发的原则,并概述了EMBL-EBI的数据库集合,以补充本期其他地方提供的单个数据库的审查。
Molecular Biology has been at the heart of the ‘big data’ revolution from its very beginning, and the need for access to biological data is a common thread running from the 1965 publication of Dayhoff’s ‘Atlas of Protein Sequence and Structure’ through the Human Genome Project in the late 1990s and early 2000s to today’s population-scale sequencing initiatives. The European Bioinformatics Institute (EMBL-EBI; http://www.ebi.ac.uk) is one of three organizations worldwide that provides free access to comprehensive, integrated molecular data sets. Here, we summarize the principles underpinning the development of these public resources and provide an overview of EMBL-EBI’s database collection to complement the reviews of individual databases provided elsewhere in this issue.
DOI: 10.1107/s0907444913001157
发表时间: 2013-05
期刊: Acta crystallographica. Section D, Biological crystallography
影响因子: --
作者:
Gutmanas A;Oldfield TJ;Patwardhan A;Sen S;Velankar S;Kleywegt GJ
通讯作者: Kleywegt GJ
DOI: 10.1038/nature11041
发表时间: 2012-07-05
期刊: NATURE
影响因子: 64.8
作者:
Dasmahapatra, Kanchon K.;Walters, James R.;Briscoe, Adriana D.;Davey, John W.;Whibley, Annabel;Nadeau, Nicola J.;Zimin, Aleksey V.;Hughes, Daniel S. T.;Ferguson, Laura C.;Martin, Simon H.;Salazar, Camilo;Lewis, James J.;Adler, Sebastian;Ahn, Seung-Joon;Baker, Dean A.;Baxter, Simon W.;Chamberlain, Nicola L.;Chauhan, Ritika;Counterman, Brian A.;Dalmay, Tamas;Gilbert, Lawrence E.;Gordon, Karl;Heckel, David G.;Hines, Heather M.;Hoff, Katharina J.;Holland, Peter W. H.;Jacquin-Joly, Emmanuelle;Jiggins, Francis M.;Jones, Robert T.;Kapan, Durrell D.;Kersey, Paul;Lamas, Gerardo;Lawson, Daniel;Mapleson, Daniel;Maroja, Luana S.;Martin, Arnaud;Moxon, Simon;Palmer, William J.;Papa, Riccardo;Papanicolaou, Alexie;Pauchet, Yannick;Ray, David A.;Rosser, Neil;Salzberg, Steven L.;Supple, Megan A.;Surridge, Alison;Tenger-Trolander, Ayse;Vogel, Heiko;Wilkinson, Paul A.;Wilson, Derek;Yorke, James A.;Yuan, Furong;Balmuth, Alexi L.;Eland, Cathlene;Gharbi, Karim;Thomson, Marian;Gibbs, Richard A.;Han, Yi;Jayaseelan, Joy C.;Kovar, Christie;Mathew, Tittu;Muzny, Donna M.;Ongeri, Fiona;Pu, Ling-Ling;Qu, Jiaxin;Thornton, Rebecca L.;Worley, Kim C.;Wu, Yuan-Qing;Linares, Mauricio;Blaxter, Mark L.;Ffrench-Constant, Richard H.;Joron, Mathieu;Kronforst, Marcus R.;Mullen, Sean P.;Reed, Robert D.;Scherer, Steven E.;Richards, Stephen;Mallet, James;McMillan, W. Owen;Jiggins, Chris D.
通讯作者: Jiggins, Chris D.
基因本体论:2011年的增强。
DOI: 10.1093/nar/gkr1028
发表时间: 2012-01
影响因子: 14.9
作者:
Gene Ontology Consortium
通讯作者: Gene Ontology Consortium
DOI: 10.1093/nar/gkr937
发表时间: 2012-01
影响因子: 14.9
作者:
Gostev M;Faulconbridge A;Brandizi M;Fernandez-Banet J;Sarkans U;Brazma A;Parkinson H
通讯作者: Parkinson H
DOI: 10.1093/nar/gks1004
发表时间: 2013-01
影响因子: 14.9
作者:
Haug K;Salek RM;Conesa P;Hastings J;de Matos P;Rijnbeek M;Mahendraker T;Williams M;Neumann S;Rocca-Serra P;Maguire E;González-Beltrán A;Sansone SA;Griffin JL;Steinbeck C
通讯作者: Steinbeck C