COCONUT online: Collection of Open Natural Products database.

COCONUT online: Collection of Open Natural Products database.
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DOI:
10.1186/s13321-020-00478-9
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发表时间:
2021-01-10
影响因子:
8.6
通讯作者:
Steinbeck C
Steinbeck C
中科院分区:
化学2区
文献类型:
--
作者:
Sorokina M;Merseburger P;Rajan K;Yirik MA;Steinbeck C

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天然产物(NPs)是由生物体产生的小分子,由于其中许多具有生物活性,因此在药理学和其他工业中具有潜在的应用。这种潜力引起了世界各地和不同应用领域对NP研究的极大兴趣,因此,多年来,已经观察到概括性和主题性NP数据库的倍增。然而,目前还没有在线资源将所有已知的NP重新组合在一个地方,这将大大简化NP研究,并允许计算筛选和其他计算机应用。在这篇手稿中,我们提出了开放天然产物的COLLECtion(COCONUT)的在线版本:从开放源收集的阐明和预测的NP的聚合数据集和浏览,搜索和轻松快速下载NP的Web界面。COCONUT网站可在https://coconut.naturalproducts.net上免费获得。
Natural products (NPs) are small molecules produced by living organisms with potential applications in pharmacology and other industries as many of them are bioactive. This potential raised great interest in NP research around the world and in different application fields, therefore, over the years a multiplication of generalistic and thematic NP databases has been observed. However, there is, at this moment, no online resource regrouping all known NPs in just one place, which would greatly simplify NPs research and allow computational screening and other in silico applications. In this manuscript we present the online version of the COlleCtion of Open Natural prodUcTs (COCONUT): an aggregated dataset of elucidated and predicted NPs collected from open sources and a web interface to browse, search and easily and quickly download NPs. COCONUT web is freely available at https://coconut.naturalproducts.net.
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