The Nucleic Acid Knowledgebase: a new portal for 3D structural information about nucleic acids.

The Nucleic Acid Knowledgebase: a new portal for 3D structural information about nucleic acids.
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核酸知识库:核酸3D结构信息的新门户。

DOI:
10.1093/nar/gkad957
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发表时间:
2024-01-05
影响因子:
14.9
通讯作者:
Zirbel, Craig L.
Zirbel, Craig L.
中科院分区:
生物学2区
文献类型:
--
作者:
Lawson, Catherine L.;Berman, Helen M.;Chen, Li;Vallat, Brinda;Zirbel, Craig L.

文献摘要

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核酸知识库(nakb.org)是一个新的数据资源,每周更新,用于实验确定的含有DNA和/或RNA核酸聚合物及其生物组件的3D结构。NAKB对所有主要结构测定方法(x射线、NMR和EM)得出的含核酸结构进行索引,包括所有由蛋白质数据库(PDB)持有的核酸结构。作为核酸数据库(NDB)的计划继任者,NAKB的设计保留了NDB的所有功能,并提供了新的以核酸为中心的内容,包括结构和功能注释,以及来自外部资源的注释和链接。已经开发了各种自定义交互工具,以实现对NAKB内容的快速探索和深入。
The Nucleic Acid Knowledgebase (nakb.org) is a new data resource, updated weekly, for experimentally determined 3D structures containing DNA and/or RNA nucleic acid polymers and their biological assemblies. NAKB indexes nucleic acid-containing structures derived from all major structure determination methods (X-ray, NMR and EM), including all held by the Protein Data Bank (PDB). As the planned successor to the Nucleic Acid Database (NDB), NAKB’s design preserves all functionality of the NDB and provides novel nucleic acid-centric content, including structural and functional annotations, as well as annotations from and links to external resources. A variety of custom interactive tools have been developed to enable rapid exploration and drill-down of NAKB’s content.
DOI: 10.1093/nar/gky949
发表时间: 2019-01-08
影响因子: 14.9
作者:
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通讯作者: wwPDB consortium
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发表时间: 2012-12-01
期刊: Bioinformatics (Oxford, England)
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