ValiDichro: a website for validating and quality control of protein circular dichroism spectra.

ValiDichro: a website for validating and quality control of protein circular dichroism spectra.
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DOI:
10.1093/nar/gkt287
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发表时间:
2013-07
影响因子:
14.9
通讯作者:
Wallace BA
Wallace BA
中科院分区:
生物学2区
文献类型:
--
作者:
Woollett B;Whitmore L;Janes RW;Wallace BA

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圆二色性(CD)光谱作为一种检测蛋白质结构、折叠和构象变化的技术在结构生物学中得到广泛应用。开发了一个新的服务器ValiDichro,用于检查光盘光谱数据和元数据的质量和有效性,既有助于数据收集和处理,也可作为出版物中光谱的验证程序。ValiDichro目前包括25项数据完整性、一致性和质量测试。对于所完成的每个测试,不仅生成验证报告,而且还向用户提供纠正或改进数据的建议。ValiDichro服务器可在http://valispec.cryst.bbk.ac.uk/circularDichroism/ValiDichro/upload.html上免费获得。
Circular dichroism (CD) spectroscopy is widely used in structural biology as a technique for examining the structure, folding and conformational changes of proteins. A new server, ValiDichro, has been developed for checking the quality and validity of CD spectral data and metadata, both as an aid to data collection and processing and as a validation procedure for spectra to be included in publications. ValiDichro currently includes 25 tests for data completeness, consistency and quality. For each test that is done, not only is a validation report produced, but the user is also provided with suggestions for correcting or improving the data. The ValiDichro server is freely available at http://valispec.cryst.bbk.ac.uk/circularDichroism/ValiDichro/upload.html.
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期刊: NATURE PROTOCOLS
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