SZGR: a comprehensive schizophrenia gene resource.

SZGR: a comprehensive schizophrenia gene resource.
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DOI:
10.1038/mp.2009.93
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发表时间:
2010-05
影响因子:
11
通讯作者:
--
中科院分区:
医学1区
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--
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精神分裂症是一种主要的衰弱精神疾病,影响着全球约1%的人口。在过去的二十年里,人们花费了大量的努力来确定影响这种疾病易感性的基因。尽管有一种强烈的趋势是将来自各种基因研究的数据及其相关的生物信息整合到许多复杂疾病的综合资源中,但我们还无法找到针对精神分裂症或任何其他精神疾病的这样的努力。在这里,我们介绍了精神分裂症基因资源(SZGR),这是一个具有用户友好的Web界面的综合数据库。SZGR存储来自所有可用来源的遗传数据,包括关联研究、连锁扫描、基因表达、文献、基因本体论(GO)注释、基因网络、细胞和调控途径以及microRNAs及其靶点。此外,SZGR还提供在线工具,用于数据浏览和搜索、数据集成、定制基因排名和图形显示。该系统可以方便地应用于其他复杂疾病,特别是其他精神障碍。SZGR数据库可在http://bioinfo.vipbg.vcu.edu:8080/SZGR/.上获得
Schizophrenia is a major debilitating psychiatric disorder affecting approximately one percent of the population worldwide. A tremendous amount of effort has been expended in the past two decades to identify genes influencing susceptibility to this disorder. Although there is a strong trend towards integrating the data from various genetic studies and their related biological information into a comprehensive resource for many complex diseases, we have been unable to find such an effort for schizophrenia or any other psychiatric disorder yet. Here, we present Schizophrenia Gene Resource (SZGR), a comprehensive database with user-friendly web interface. SZGR deposits genetic data from all available sources including association studies, linkage scans, gene expression, literature, Gene Ontology (GO) annotations, gene networks, cellular and regulatory pathways, and microRNAs and their target sites. Moreover, SZGR provides online tools for data browse and search, data integration, custom gene ranking, and graphical presentation. This system can be easily applied to other complex diseases, especially other psychiatric disorders. The SZGR database is available at http://bioinfo.vipbg.vcu.edu:8080/SZGR/.
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