Complete genome sequence of the facultatively chemolithoautotrophic and methylotrophic alpha Proteobacterium Starkeya novella type strain (ATCC 8093(T)).
Complete genome sequence of the facultatively chemolithoautotrophic and methylotrophic alpha Proteobacterium Starkeya novella type strain (ATCC 8093(T)).
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DOI：
10.4056/sigs.3006378
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发表时间：
2012-10-10
影响因子：
--
通讯作者：
Woyke T
中科院分区：
文献类型：
--
作者：
Kappler U;Davenport K;Beatson S;Lucas S;Lapidus A;Copeland A;Berry KW;Glavina Del Rio T;Hammon N;Dalin E;Tice H;Pitluck S;Richardson P;Bruce D;Goodwin LA;Han C;Tapia R;Detter JC;Chang YJ;Jeffries CD;Land M;Hauser L;Kyrpides NC;Göker M;Ivanova N;Klenk HP;Woyke T
中篇小说Starkeya(Starkey 1934)，Kelly等人。2000是根瘤目的黄杆菌科属的成员，到目前为止在基因组水平上还没有得到很好的描述。这一物种的培养最令人感兴趣的是它们兼性的化学自养生活方式，这使得它们既能消耗二氧化碳，又能产生二氧化碳。这一特征使短小葡萄球菌成为一种有趣的模式生物，用于研究二氧化碳消费和生产之间的转换所需的调控网络的基因组基础，二氧化碳是全球碳循环的关键组成部分。此外，新月形链球菌能生长在各种无机硫化物和几种含氯化合物上，如甲醇。除了固氮固氮菌外，新月乳杆菌是黄杆菌科中第二个拥有模式菌株基因组全序列的物种。目前对该类群的分类与16S rRNA数据有很大的冲突。基因组数据表明，生物体的生理能力可能被低估了。作为美国能源部联合基因组研究所社区测序计划(CSP)的一部分，该染色体长4,765,023个核苷酸，其4,511个蛋白质编码基因和52个RNA基因被测序。
Starkeya novella (Starkey 1934) Kelly et al. 2000 is a member of the family Xanthobacteraceae in the order ‘Rhizobiales’, which is thus far poorly characterized at the genome level. Cultures from this species are most interesting due to their facultatively chemolithoautotrophic lifestyle, which allows them to both consume carbon dioxide and to produce it. This feature makes S. novella an interesting model organism for studying the genomic basis of regulatory networks required for the switch between consumption and production of carbon dioxide, a key component of the global carbon cycle. In addition, S. novella is of interest for its ability to grow on various inorganic sulfur compounds and several C1-compounds such as methanol. Besides Azorhizobium caulinodans, S. novella is only the second species in the family Xanthobacteraceae with a completely sequenced genome of a type strain. The current taxonomic classification of this group is in significant conflict with the 16S rRNA data. The genomic data indicate that the physiological capabilities of the organism might have been underestimated. The 4,765,023 bp long chromosome with its 4,511 protein-coding and 52 RNA genes was sequenced as part of the DOE Joint Genome Institute Community Sequencing Program (CSP) 2008.
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影响因子：
10.7
作者：
Castresana, J
通讯作者：
Castresana, J
影响因子：
14.9
作者：
Griffiths-Jones, S;Bateman, A;Eddy, SR
通讯作者：
Eddy, SR
DOI：
10.1111/j.1095-8312.2007.00864.x
发表时间：
2007-12-01
影响因子：
1.9
作者：
Hess, Pablo N.;De Moraes Russo, Claudia A.
通讯作者：
De Moraes Russo, Claudia A.
影响因子：
3.2
作者：
ALEEM, MIH
通讯作者：
ALEEM, MIH
DOI：
10.1016/0006-291x(65)90610-8
发表时间：
1965-01-01
影响因子：
3.1
作者：
ALEEM, MIH;HUANG, E
通讯作者：
HUANG, E