RMD: a rice mutant database for functional analysis of the rice genome.

RMD: a rice mutant database for functional analysis of the rice genome.
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DOI:
10.1093/nar/gkj016
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发表时间:
2006-01-01
影响因子:
14.9
通讯作者:
Wang S
Wang S
中科院分区:
生物学2区
文献类型:
--
作者:
Zhang J;Li C;Wu C;Xiong L;Chen G;Zhang Q;Wang S

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水稻突变体数据库(RMD,)是用于收集、管理和搜索由增强子捕获系统产生的T-DNA插入突变体信息的档案。我们已经生成了约 129 000 个水稻突变体(增强子陷阱)品系,目前正在收集到数据库中。 RMD收集的信息包括突变表型、报告基因表达模式、T-DNA插入位点的侧翼序列、种子可用性等,并且可以通过各自的ID、关键词、核苷酸序列或蛋白质序列在网站上进行搜索。该数据库既是用于识别新基因和调控元件的突变体集合,也是用于靶基因在特定组织或特定生长阶段异位表达的模式系集合。
Rice Mutant Database (RMD, ) is an archive for collecting, managing and searching information of the T-DNA insertion mutants generated by an enhancer trap system. We have generated ∼129 000 rice mutant (enhancer trap) lines that are now being gathered in the database. Information collected in RMD includes mutant phenotypes, reporter-gene expression patterns, flanking sequences of T-DNA insertional sites, seed availability and others, and can be searched by respective ID, keyword, nucleotide sequence or protein sequence on the website. This database is both a mutant collection for identifying novel genes and regulatory elements and a pattern line collection for ectopic expression of target gene in specific tissue or at specific growth stage.
DOI: 10.1038/nature03895
发表时间: 2005-08-11
期刊: NATURE
影响因子: 64.8
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