Single-cell immunology of SARS-CoV-2 infection.

Single-cell immunology of SARS-CoV-2 infection.
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DOI:
10.1038/s41587-021-01131-y
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发表时间:
2022-01
影响因子:
46.9
通讯作者:
Gottardo, Raphael
Gottardo, Raphael
中科院分区:
工程技术1区
文献类型:
--
作者:
Tian, Yuan;Carpp, Lindsay N.;Miller, Helen E. R.;Zager, Michael;Newell, Evan W.;Gottardo, Raphael

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更好地了解与SARS-CoV-2的保护性或病理性免疫相关的免疫细胞亚群和分子因素,可以帮助开发冠状病毒疾病(COVID-19)的疫苗和治疗方法。单细胞技术,如流式细胞术、质谱仪、单细胞转录组学和单细胞多组学分析,在剖析单个细胞之间免疫反应的异质性和揭示COVID-19发病机制的分子机制方面提供了相当大的希望。特别值得注意的是,单细胞免疫分析研究已经确定了与COVID-19疾病严重程度相关的先天性和适应性免疫细胞亚群,以及与COVID-19疫苗和治疗开发潜在相关的免疫因子/途径。为了促进综合研究和荟萃分析,我们以可下载的标准化表格21向科学研究界提供已发表的单细胞测序数据集(总计超过320万个细胞),以及用于数据探索的交互式可视化门户。
Gaining a better understanding of the immune cell subsets and molecular factors associated with protective or pathological immunity against SARS-CoV-2 could aid the development of vaccines and therapeutics for coronavirus disease (COVID-19). Single-cell technologies, such as flow cytometry, mass cytometry, single-cell transcriptomics and single-cell multiomic profiling, offer considerable promise in dissecting the heterogeneity of immune responses among individual cells and uncovering the molecular mechanisms of COVID-19 pathogenesis. Particularly noteworthy single-cell immune profiling studies have identified innate and adaptive immune cell subsets that correlate with COVID-19 disease severity, as well as immunological factors/pathways of potential relevance to the development of vaccines and treatments for COVID-19. To facilitate integrative studies and meta-analyses, we provide to the scientific research community in download-ready, standardized form 21 published single-cell sequencing datasets (over 3.2 million cells in total), as well as an interactive visualization portal for data exploration.
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