A transcriptional toolbox for exploring peripheral neuro-immune interactions

A transcriptional toolbox for exploring peripheral neuro-immune interactions
复制标题

用于探索外周神经免疫相互作用的转录工具箱

DOI:
10.1101/813980
复制
发表时间:
2019
期刊:
--
影响因子:
--
通讯作者:
Liang Z
Liang Z
中科院分区:
--
文献类型:
--
作者:
Liang Z

文献摘要

参考文献

被引文献

相似文献

免疫细胞和周围神经元之间的正确沟通对保护我们的身体至关重要。它的破坏在许多常见的,通常是痛苦的情况下被观察到,包括关节炎,神经病变,炎症性肠或膀胱疾病。在这里,我们使用流式细胞术和细胞类型特异性RNA测序(RNA-seq)表征了神经性疼痛小鼠模型的免疫反应。我们没有发现明显的性别差异,但炎症反应非常持久,单核细胞和巨噬细胞的数量在初始损伤后3个半月增加。这就提出了一个问题,即通常将疼痛分为“炎症性”和“神经性”是否在机制上是合适的。最后,我们将我们的数据与其他已发表的神经元、巨噬细胞和雪旺细胞在初始状态和神经损伤状态下的RNA-seq数据集进行了比对。结果是一个实用的基于网络的工具,用于外周神经免疫相互作用的转录数据挖掘。http://rnaseq-browser。herokuapp。com/
Correct communication between immune cells and peripheral neurons is crucial for the protection of our bodies. Its breakdown is observed in many common, often painful conditions, including arthritis, neuropathies, and inflammatory bowel or bladder disease. Here, we have characterised the immune response in a mouse model of neuropathic pain using flow cytometry and cell-typespecific RNA sequencing (RNA-seq). We found few striking sex differences, but a very persistent inflammatory response, with increased numbers of monocytes and macrophages up to 3 1/2 months after the initial injury. This raises the question of whether the commonly used categorisation of pain into “inflammatory” and “neuropathic” is one that is mechanistically appropriate. Finally, we collated our data with other published RNA-seq data sets on neurons, macrophages, and Schwann cells in naive and nerve injury states. The result is a practical web-based tool for the transcriptional data mining of peripheral neuroimmune interactions. http://rnaseq-browser. herokuapp. com/
DOI: 10.3389/fnmol.2014.00087
发表时间: 2014
影响因子: 4.8
作者:
Thakur M;Crow M;Richards N;Davey GI;Levine E;Kelleher JH;Agley CC;Denk F;Harridge SD;McMahon SB
通讯作者: McMahon SB
DOI: 10.1016/j.cell.2014.11.023
发表时间: 2014-12-04
期刊: Cell
影响因子: 64.5
作者:
Gosselin D;Link VM;Romanoski CE;Fonseca GJ;Eichenfield DZ;Spann NJ;Stender JD;Chun HB;Garner H;Geissmann F;Glass CK
通讯作者: Glass CK
DOI: 10.1111/j.1749-6632.2002.tb04234.x
发表时间: 2002-01-01
期刊: NEUROENDOCRINE IMMUNE BASIS OF THE RHEUMATIC DISEASES II, PROCEEDINGS
影响因子: --
作者:
Schaible, HG;Ebersberger, A;Von Banchet, GS
通讯作者: Von Banchet, GS
DOI: 10.1093/bioinformatics/btx435
发表时间: 2017-11-01
期刊: BIOINFORMATICS
影响因子: 5.8
作者:
Vieth, Beate;Ziegenhain, Christoph;Hellmann, Ines
通讯作者: Hellmann, Ines
周围神经驻留巨噬细胞是具有组织特异性编程的小胶质细胞样细胞
DOI: 10.1101/2019.12.19.883546
发表时间: 2019
期刊: bioRxiv
影响因子: --
作者:
Peter L. Wang;A. Yim;Kiwook Kim;D. Avey;R. Czepielewski;M. Colonna;J. Milbrandt;G. Randolph
通讯作者: G. Randolph