OpenMS - an open-source software framework for mass spectrometry.
OpenMS - an open-source software framework for mass spectrometry.
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DOI：
10.1186/1471-2105-9-163
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发表时间：
2008-03-26
影响因子：
3
通讯作者：
Kohlbacher O
中科院分区：
文献类型：
--
作者：
Sturm M;Bertsch A;Gröpl C;Hildebrandt A;Hussong R;Lange E;Pfeifer N;Schulz-Trieglaff O;Zerck A;Reinert K;Kohlbacher O
质谱是蛋白质组学和代谢组学中高通量分析的基本分析技术。开发新的分离技术、精确的质量分析仪和实验方案是一个非常活跃的研究领域。这导致更复杂的实验设置产生越来越多的数据量。因此，数据分析目前往往是实验研究的瓶颈。尽管现在有许多数据分析任务的软件工具，但它们通常很难相互联合收割机，或者不够灵活，无法快速原型化新的分析工作流程。我们提出了OpenMS，一个软件框架，快速应用程序开发质谱。OpenMS被设计成便携、易于使用和健壮的，同时提供从基本数据结构到用于数据分析的复杂算法的丰富功能。这已经在几项研究中得到证实。OpenMS在LGPL下可从项目网站获得。
Mass spectrometry is an essential analytical technique for high-throughput analysis in proteomics and metabolomics. The development of new separation techniques, precise mass analyzers and experimental protocols is a very active field of research. This leads to more complex experimental setups yielding ever increasing amounts of data. Consequently, analysis of the data is currently often the bottleneck for experimental studies. Although software tools for many data analysis tasks are available today, they are often hard to combine with each other or not flexible enough to allow for rapid prototyping of a new analysis workflow. We present OpenMS, a software framework for rapid application development in mass spectrometry. OpenMS has been designed to be portable, easy-to-use and robust while offering a rich functionality ranging from basic data structures to sophisticated algorithms for data analysis. This has already been demonstrated in several studies. OpenMS is available under the Lesser GNU Public License (LGPL) from the project website at .
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