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Statistical Inference for Tree Models with Strong Hierarchical Autocorrelation

Statistical Inference for Tree Models with Strong Hierarchical Autocorrelation
具有强层次自相关的树模型的统计推断
批准号:
1106483
负责人:
Cecile Ane
金额:
$20.65万
依托单位国家:
美国
项目类别:
Continuing Grant
财政年份:
2011
资助国家:
美国
项目状态:
已结题
起止时间:
2011-07-01 至 2015-06-30

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中文摘要
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英文摘要
Models with tree-structured, hierarchical autocorrelation are used when sampling units are related to each other. Their inheritance history is modeled by a tree, which is used to parametrize the residual correlation structure among observations. The project will develop an asymptotic theory for these autocorrelation models, arising from an Ornstein-Uhlenbeck process along the tree. As the number of tips in the tree grows indefinitely, the investigators will determine which parameters are microergodic and which parameters are not. The asymptotic consistency and the rate of convergence of the maximum likelihood estimator are expected to vary importantly depending on the microergodicity of the parameter and on topological properties of the tree. Analogies will be built between this asymptotic framework and the infill asymptotic framework in spatial statistics, when observations are collected on a dense set of locations within a bounded region of space. The project will refine the concept of effective sample size for hierarchically autocorrelated data and study optimal sampling designs. This work will provide important steps toward developing appropriate model selection tools for the detection of possibly many Ornstein-Uhlenbeck selection regimes, with a large number of model parameters compared to the sample size. Tree models with hierarchical autocorrelation arose first in evolutionary biology and ecology, with the comparison of biological species. These models are now used in many other areas, ranging from the study of rapidly evolving viruses to the study of human language evolution. The Ornstein-Uhlenbeck model is used to detect selection as opposed to neutral evolution, to discover changes in selective regime and to determine driving factors of selection. The project will provide a unified statistical asymptotic framework for these models and will inform best practices for empirical studies. Computational tools will be broadly disseminated, and opportunities will be provided for training at the interface between statistics and biology.
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Scalable Model-Based Reconstruction of Network Evolution
  • 批准号:
    1902892
  • 项目类别:
    Continuing Grant
  • 资助金额:
    $72.42万
  • 财政年份:
    2019
  • 负责人:
    Cecile Ane
  • 依托单位:
Reconciling gene trees: Deciphering the source and extent of genealogical discordance
  • 批准号:
    0949121
  • 项目类别:
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  • 资助金额:
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  • 财政年份:
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  • 负责人:
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  • 依托单位:
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