CAREER: A Cellular and Molecular Analysis of a Specific Retinal Lineage that Generates Cone Photoreceptors and Horizontal Cells

职业：对产生视锥细胞和水平细胞的特定视网膜谱系进行细胞和分子分析

• 批准号: 1453044
• 负责人: Mark Emerson
• 金额: $ 75万
• 依托单位: CUNY City College
• 依托单位国家: 美国
• 项目类别: Continuing Grant
• 财政年份: 2015
• 资助国家: 美国
• 起止时间: 2015-09-01 至 2024-02-29
• 项目状态: 已结题
• 来源: https://www.nsf.gov/awardsearch/showAward?AWD_ID=1453044&HistoricalAwards=false
• 关键词: CAREER; Cellular; Molecular; Analysis; Specific

An embryo develops from a single cell and this cell generates new cells with increasingly specific functions. For each tissue, there are progenitor cells that then generate more new cells that make up that tissue. Cells that allow us to see color, cone photoreceptors, are formed from progenitor cells in the developing eye. This project will focus on how the progenitor cells form these photoreceptors. The information that directs this process is found in DNA. Experiments will use specific DNA sequences that are involved in the formation of cone photoreceptors to track the progenitor cells in real time as they change into new cells that become cone photoreceptors. This research is expected to lead to new insights into how unique cells are formed during eye development. In addition, this project will engage early stage undergraduates to participate in both this research project and to be leaders of an outreach activity to the New York Public School system. Middle school students will be introduced to what it is to be a scientist, which will open the door to the possibility that they can also become one. This CAREER award will allow the Principal Investigator to develop a sustainable integrated research and outreach program at a large minority serving institution in Harlem.It has recently been recognized that there are retinal progenitor cell populations that are restricted in the cell types that they will generate. The goal of this study is to investigate one of these populations that preferentially generates cone photoreceptors and horizontal cells. To accomplish this, multiple approaches that use cell-type specific transcriptional regulatory elements will be applied. At the cellular level, these elements will be used to determine the subtypes of cone and horizontal cells formed from these progenitor cells. In addition, live imaging will be used to analyze the daughter fates of single cone/horizontal cell progenitors to define the heterogeneity of the lineage. At the molecular level, the role of the Notch-Delta signaling pathway in this progenitor lineage will be examined. Finally, whole transcriptome and epigenome signatures of cells as they transition through the cone/horizontal cell progenitor lineage will be determined. At its conclusion, this project is expected to provide a novel molecular examination of a genetically defined retinal lineage.

胚胎从单个细胞发育而来，这个细胞产生具有越来越多特定功能的新细胞。对于每个组织，都有祖细胞，然后产生更多的新细胞，构成该组织。让我们看到颜色的细胞，锥状光感受器，是由发育中的眼睛中的祖细胞形成的。该项目将重点关注祖细胞如何形成这些光感受器。指导这一过程的信息存在于DNA中。 实验将使用参与视锥光感受器形成的特定DNA序列，以真实的时间跟踪祖细胞，因为它们变成成为视锥光感受器的新细胞。这项研究有望为眼睛发育过程中独特细胞的形成提供新的见解。此外，该项目将吸引早期阶段的本科生参加这一研究项目，并成为纽约公立学校系统外展活动的领导者。中学生将被介绍给什么是一个科学家，这将打开大门的可能性，他们也可以成为一个。这个职业奖将允许首席研究员在哈莱姆的一个大型少数民族服务机构开发一个可持续的综合研究和推广计划。最近人们认识到，有视网膜祖细胞群体的细胞类型，他们将产生限制。本研究的目的是调查这些人群中的一个，优先产生锥光感受器和水平细胞。为了实现这一点，将应用使用细胞类型特异性转录调控元件的多种方法。在细胞水平，这些元素将用于确定从这些祖细胞形成的锥细胞和水平细胞的亚型。此外，将使用实时成像来分析单锥/水平细胞祖细胞的子代命运，以定义谱系的异质性。在分子水平上，将检查Notch-Delta信号通路在该祖细胞谱系中的作用。最后，将确定细胞在通过视锥/水平细胞祖细胞谱系过渡时的全转录组和表观基因组特征。在其结论，该项目预计将提供一种新的分子检查的遗传定义的视网膜谱系。

项目成果

Lineage tracing analysis of cone photoreceptor associated cis-regulatory elements in the developing chicken retina

• DOI: 10.1038/s41598-019-45750-7
• 发表时间: 2019-06-27
• 期刊: SCIENTIFIC REPORTS
• 影响因子: 4.6
• 作者: Schick, Estie;McCaffery, Sean D.;Emerson, Mark M.
• 通讯作者: Emerson, Mark M.

Cis-regulatory analysis of Onecut1 expression in fate-restricted retinal progenitor cells

命运限制性视网膜祖细胞 Onecut1 表达的顺式调控分析

• DOI: 10.1186/s13064-020-00142-w
• 发表时间: 2020
• 期刊: Neural Development
• 影响因子: 3.6
• 作者: Patoori, Sruti;Jean-Charles, Nathalie;Gopal, Ariana;Sulaiman, Sacha;Gopal, Sneha;Wang, Brian;Souferi, Benjamin;Emerson, Mark M.
• 通讯作者: Emerson, Mark M.